Aliases : Aspi01Gene33810
Description : not classified & original description: none
Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Aspi01Gene33810.t1 | |
| Cluster | HCCA: Cluster_119 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00031p00067070 | emb1899, EMB175, EMB166 | Pentatricopeptide repeat-containing protein At5g03800... | 0.02 | OrthoFinder output from all 47 species | |
| AMTR_s00077p00031710 | evm_27.TU.AmTr_v1... | Pentatricopeptide repeat-containing protein At2g27610... | 0.03 | OrthoFinder output from all 47 species | |
| AMTR_s00129p00082590 | evm_27.TU.AmTr_v1... | Pentatricopeptide repeat-containing protein At1g19720... | 0.03 | OrthoFinder output from all 47 species | |
| AT5G44785 | OSB3 | organellar single-stranded DNA binding protein 3 | 0.03 | OrthoFinder output from all 47 species | |
| AT5G52630 | MEF1 | mitochondrial RNAediting factor 1 | 0.01 | OrthoFinder output from all 47 species | |
| Adi_g005234 | No alias | ssDNA-binding protein *(OSB) & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Adi_g101185 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Adi_g101277 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Adi_g108175 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ala_g12481 | OTP82 | not classified & original description: none | 0.01 | OrthoFinder output from all 47 species | |
| Als_g05672 | CRR22 | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Als_g17470 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Als_g27894 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Als_g55750 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Als_g61269 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aob_g07355 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aob_g17095 | OTP84 | not classified & original description: none | 0.01 | OrthoFinder output from all 47 species | |
| Aop_g23671 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aop_g30728 | No alias | ssDNA-binding protein *(OSB) & original description: none | 0.01 | OrthoFinder output from all 47 species | |
| Aspi01Gene63483.t1 | CRR22, Aspi01Gene63483 | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Azfi_s0092.g043152 | No alias | not classified & original description: CDS=1-744 | 0.03 | OrthoFinder output from all 47 species | |
| Cba_g07718 | CRR22 | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Cba_g12399 | DOT4 | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Cba_g19555 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Cba_g19898 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Cba_g34546 | No alias | ssDNA-binding protein *(OSB) & original description: none | 0.01 | OrthoFinder output from all 47 species | |
| Ceric.38G035700.1 | Ceric.38G035700 | not classified & original description: pacid=50579678... | 0.01 | OrthoFinder output from all 47 species | |
| Cre12.g483700 | OSB4 | Cell cycle.organelle machineries.DNA... | 0.01 | OrthoFinder output from all 47 species | |
| Dcu_g06366 | CRR22 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dcu_g06831 | PTAC9, OSB2 | ssDNA-binding protein *(OSB) & original description: none | 0.01 | OrthoFinder output from all 47 species | |
| Dcu_g45215 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dcu_g49048 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Dcu_g50137 | CRR22 | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Dde_g01560 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dde_g02941 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dde_g11099 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dde_g28824 | No alias | ssDNA-binding protein *(OSB) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| GSVIVT01024912001 | No alias | Pentatricopeptide repeat-containing protein At4g13650... | 0.02 | OrthoFinder output from all 47 species | |
| LOC_Os01g10800.1 | DOT4, LOC_Os01g10800 | Pentatricopeptide repeat-containing protein DOT4,... | 0.06 | OrthoFinder output from all 47 species | |
| LOC_Os02g50280.1 | CRR22, LOC_Os02g50280 | Pentatricopeptide repeat-containing protein At1g11290,... | 0.04 | OrthoFinder output from all 47 species | |
| LOC_Os03g04390.1 | LOC_Os03g04390 | Pentatricopeptide repeat-containing protein At4g35130,... | 0.02 | OrthoFinder output from all 47 species | |
| LOC_Os08g06490.2 | SLO1, LOC_Os08g06490 | Pentatricopeptide repeat-containing protein At4g22760... | 0.03 | OrthoFinder output from all 47 species | |
| Len_g22919 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Len_g28860 | EMB2758 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Len_g41147 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Lfl_g04966 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Lfl_g07419 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| MA_23144g0010 | No alias | Pentatricopeptide repeat-containing protein At2g13600... | 0.01 | OrthoFinder output from all 47 species | |
| MA_81514g0010 | CRR22 | Pentatricopeptide repeat-containing protein At1g11290,... | 0.02 | OrthoFinder output from all 47 species | |
| MA_82569g0020 | CRR22 | Pentatricopeptide repeat-containing protein At1g11290,... | 0.01 | OrthoFinder output from all 47 species | |
| Msp_g17452 | No alias | not classified & original description: none | 0.01 | OrthoFinder output from all 47 species | |
| Msp_g28692 | No alias | not classified & original description: none | 0.01 | OrthoFinder output from all 47 species | |
| Nbi_g04397 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Nbi_g06230 | No alias | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Nbi_g06323 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Nbi_g20500 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Nbi_g27965 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Nbi_g28136 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Nbi_g32642 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ore_g17481 | EMB2758 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ore_g34092 | CRR22 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Pnu_g20310 | CRR22 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Pnu_g30070 | CRR2 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ppi_g33573 | No alias | ssDNA-binding protein *(OSB) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ppi_g53953 | EMB2758 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0006.g003208 | No alias | monogalactosyldiacylglycerol lipase *(HIL1) & original... | 0.04 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0009.g004386 | No alias | not classified & original description: CDS=1-2367 | 0.03 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0024.g009196 | No alias | not classified & original description: CDS=1-579 | 0.03 | OrthoFinder output from all 47 species | |
| Sam_g08403 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Sam_g09699 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Sam_g11238 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Sam_g13656 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Sam_g26606 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Sam_g28579 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Sam_g36251 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Sam_g45851 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Smo74842 | OTP86 | Pentatricopeptide repeat-containing protein At3g57430,... | 0.02 | OrthoFinder output from all 47 species | |
| Solyc01g081020.1.1 | Solyc01g081020 | RNA editing factor (OTP80) | 0.03 | OrthoFinder output from all 47 species | |
| Solyc01g095690.2.1 | Solyc01g095690 | Pentatricopeptide repeat-containing protein At4g01030,... | 0.02 | OrthoFinder output from all 47 species | |
| Solyc02g069500.1.1 | Solyc02g069500 | Pentatricopeptide repeat-containing protein At4g21300... | 0.03 | OrthoFinder output from all 47 species | |
| Spa_g10971 | No alias | not classified & original description: none | 0.01 | OrthoFinder output from all 47 species | |
| Tin_g03804 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Tin_g17460 | CRR22 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Zm00001e021457_P001 | CRR22, Zm00001e021457 | Pentatricopeptide repeat-containing protein At1g11290,... | 0.05 | OrthoFinder output from all 47 species | |
| Zm00001e023498_P001 | VAC1, ECB2,... | Putative pentatricopeptide repeat-containing protein... | 0.06 | OrthoFinder output from all 47 species | |
| Zm00001e031351_P001 | EMB2261, Zm00001e031351 | RNA editing factor (ECD1) | 0.02 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No Predicted GO terms available for this sequence |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR002885 | Pentatricopeptide_repeat | 731 | 756 |
| IPR002885 | Pentatricopeptide_repeat | 530 | 555 |
| IPR002885 | Pentatricopeptide_repeat | 355 | 404 |
| IPR002885 | Pentatricopeptide_repeat | 457 | 504 |
| IPR002885 | Pentatricopeptide_repeat | 254 | 301 |
| IPR002885 | Pentatricopeptide_repeat | 556 | 602 |
| IPR002885 | Pentatricopeptide_repeat | 656 | 704 |
| No external refs found! |
