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  5. Aspi01Gene34196.t1

Aspi01Gene34196.t1 (OPCL1, Aspi01Gene34196)


Aliases : OPCL1, Aspi01Gene34196

Description : not classified & original description: none


Gene families : OG0000359 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000359_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Aspi01Gene34196.t1

Target Alias Description ECC score Gene Family Method Actions
Adi_g079290 OPCL1 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g11897 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g17436 OPCL1 not classified & original description: none 0.07 OrthoFinder output from all 47 species
Aop_g27234 OPCL1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene45695.t1 OPCL1, Aspi01Gene45695 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.11G077600.1 Ceric.11G077600 not classified & original description: pacid=50595629... 0.03 OrthoFinder output from all 47 species
Ceric.11G077700.1 Ceric.11G077700 not classified & original description: pacid=50595996... 0.03 OrthoFinder output from all 47 species
Ceric.18G030000.1 Ceric.18G030000 not classified & original description: pacid=50622017... 0.03 OrthoFinder output from all 47 species
Ehy_g04748 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
GSVIVT01011541001 No alias 4-coumarate--CoA ligase-like 6 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
Gb_18693 OPCL1 OPC-8:CoA synthetase 0.02 OrthoFinder output from all 47 species
LOC_Os01g67540.1 LOC_Os01g67540 4-coumarate--CoA ligase-like 6 OS=Oryza sativa subsp.... 0.04 OrthoFinder output from all 47 species
Lfl_g01742 OPCL1 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g08577 OPCL1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g09388 OPCL1 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g42518 OPCL1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g37295 OPCL1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g42148 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pnu_g10259 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g12256 OPCL1 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pp3c3_24370V3.1 Pp3c3_24370 AMP-dependent synthetase and ligase family protein 0.02 OrthoFinder output from all 47 species
Ppi_g56806 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g56807 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g29127 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Smo123905 No alias 4-coumarate--CoA ligase-like 7 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
Tin_g32242 OPCL1 not classified & original description: none 0.06 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR000873 AMP-dep_Synth/Lig_com 47 452
IPR025110 AMP-bd_C 607 682
No external refs found!