Aspi01Gene34954.t1 (Aspi01Gene34954)


Aliases : Aspi01Gene34954

Description : not classified & original description: none


Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Aspi01Gene34954.t1

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00001p00138570 No alias Pentatricopeptide repeat-containing protein At4g02750... 0.03 OrthoFinder output from all 47 species
AMTR_s00008p00241920 No alias Pentatricopeptide repeat-containing protein At4g02750... 0.03 OrthoFinder output from all 47 species
AMTR_s00010p00113430 evm_27.TU.AmTr_v1... Pentatricopeptide repeat-containing protein At1g18485... 0.02 OrthoFinder output from all 47 species
AMTR_s00010p00259620 evm_27.TU.AmTr_v1... Pentatricopeptide repeat-containing protein At2g35030,... 0.02 OrthoFinder output from all 47 species
AMTR_s00016p00252350 evm_27.TU.AmTr_v1... Pentatricopeptide repeat-containing protein At3g22690... 0.01 OrthoFinder output from all 47 species
AMTR_s00016p00259690 evm_27.TU.AmTr_v1... Pentatricopeptide repeat-containing protein At5g46460,... 0.03 OrthoFinder output from all 47 species
AMTR_s00022p00252600 MEF1 Putative pentatricopeptide repeat-containing protein... 0.03 OrthoFinder output from all 47 species
AMTR_s00057p00137550 evm_27.TU.AmTr_v1... Pentatricopeptide repeat-containing protein At2g36980,... 0.04 OrthoFinder output from all 47 species
AMTR_s00057p00151990 evm_27.TU.AmTr_v1... Pentatricopeptide repeat-containing protein At4g13650... 0.02 OrthoFinder output from all 47 species
AMTR_s00083p00015670 No alias Putative pentatricopeptide repeat-containing protein... 0.03 OrthoFinder output from all 47 species
AMTR_s00099p00072730 MEF21,... Pentatricopeptide repeat-containing protein At5g66520... 0.02 OrthoFinder output from all 47 species
AT2G27610 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.02 OrthoFinder output from all 47 species
Adi_g018586 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g024957 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g047336 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g34145 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Ala_g11078 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Ala_g11484 CRR2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g16437 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g20034 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g24083 EMB2758 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g25745 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Ala_g31168 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g35628 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g36018 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g38174 No alias ssDNA-binding protein *(OSB) & original description: none 0.01 OrthoFinder output from all 47 species
Als_g03222 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g06363 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g06389 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Als_g07162 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Als_g08654 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g12718 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Als_g27948 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g50814 CRR22 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g05974 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g08429 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g22756 VAC1, ECB2, ATECB2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g24083 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Aob_g26992 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Aob_g28656 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g30469 CRR22 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g31716 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g32690 OTP84 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g16831 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g23385 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g57040 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene01654.t1 PTAC9, OSB2,... ssDNA-binding protein *(OSB) & original description: none 0.06 OrthoFinder output from all 47 species
Aspi01Gene54509.t1 Aspi01Gene54509 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Azfi_s0001.g000793 No alias not classified & original description: CDS=1-2415 0.01 OrthoFinder output from all 47 species
Azfi_s0001.g000999 No alias not classified & original description: CDS=128-2962 0.01 OrthoFinder output from all 47 species
Azfi_s0005.g009381 No alias not classified & original description: CDS=1-2946 0.03 OrthoFinder output from all 47 species
Azfi_s0006.g009910 EMB2758 not classified & original description: CDS=1-1803 0.03 OrthoFinder output from all 47 species
Azfi_s0027.g023504 No alias not classified & original description: CDS=132-2867 0.04 OrthoFinder output from all 47 species
Azfi_s0038.g026305 EMB2758 not classified & original description: CDS=1-1827 0.03 OrthoFinder output from all 47 species
Azfi_s0045.g030112 No alias not classified & original description: CDS=94-318 0.01 OrthoFinder output from all 47 species
Azfi_s0069.g036581 No alias not classified & original description: CDS=1-1653 0.01 OrthoFinder output from all 47 species
Azfi_s0118.g046614 No alias not classified & original description: CDS=1-2319 0.03 OrthoFinder output from all 47 species
Azfi_s0127.g048736 No alias not classified & original description: CDS=1-3153 0.03 OrthoFinder output from all 47 species
Azfi_s0405.g068372 No alias not classified & original description: CDS=1-2844 0.03 OrthoFinder output from all 47 species
Azfi_s0652.g081079 No alias not classified & original description: CDS=1-2169 0.01 OrthoFinder output from all 47 species
Azfi_s1423.g102903 No alias not classified & original description: CDS=1-2439 0.04 OrthoFinder output from all 47 species
Cba_g05974 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g06595 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g21792 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g71700 EMB2758 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.09G007000.1 Ceric.09G007000 not classified & original description: pacid=50586983... 0.01 OrthoFinder output from all 47 species
Ceric.29G083600.1 Ceric.29G083600 ssDNA-binding protein *(OSB) & original description:... 0.05 OrthoFinder output from all 47 species
Ceric.36G058400.1 Ceric.36G058400 not classified & original description: pacid=50568396... 0.01 OrthoFinder output from all 47 species
Dcu_g08450 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Dcu_g16664 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g37501 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Dcu_g38857 No alias ssDNA-binding protein *(OSB) & original description: none 0.01 OrthoFinder output from all 47 species
Dcu_g40681 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g45907 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Dcu_g46210 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Dcu_g49796 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Dde_g01560 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g05342 VAC1, ECB2, ATECB2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g05762 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g05943 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g08525 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dde_g16499 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g21679 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g22354 OTP86 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g22631 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g36344 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g36360 No alias ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g37552 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g46464 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g49830 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01025574001 No alias Pentatricopeptide repeat-containing protein At2g37320... 0.04 OrthoFinder output from all 47 species
LOC_Os01g10800.1 DOT4, LOC_Os01g10800 Pentatricopeptide repeat-containing protein DOT4,... 0.02 OrthoFinder output from all 47 species
LOC_Os01g72049.1 PTAC9, OSB2,... ssDNA-binding protein (OSB). TAC9 cofactor of... 0.02 OrthoFinder output from all 47 species
LOC_Os03g58100.1 OTP85, LOC_Os03g58100 RNA editing factor (OTP85) 0.01 OrthoFinder output from all 47 species
LOC_Os05g38190.2 LOC_Os05g38190 Pentatricopeptide repeat-containing protein At2g27610... 0.03 OrthoFinder output from all 47 species
LOC_Os07g31000.1 LOC_Os07g31000 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
LOC_Os08g13990.1 LOC_Os08g13990 Pentatricopeptide repeat-containing protein At2g37320... 0.02 OrthoFinder output from all 47 species
LOC_Os10g39460.2 LOC_Os10g39460 Putative pentatricopeptide repeat-containing protein... 0.02 OrthoFinder output from all 47 species
Len_g17570 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g30787 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g33776 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g03398 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g09042 OTP80 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g32657 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
MA_3462g0010 No alias Putative pentatricopeptide repeat-containing protein... 0.01 OrthoFinder output from all 47 species
MA_8893194g0010 MEF1 RNA editing factor (MEF1) 0.01 OrthoFinder output from all 47 species
Msp_g03892 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g03944 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Msp_g41257 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g27949 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Ore_g05576 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g20377 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g21816 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Ore_g26690 VAC1, ECB2, ATECB2 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g33192 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g38571 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g03036 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g57712 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g63296 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g20514 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g07547 OTP84 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g13334 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Ppi_g31163 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g32097 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g39236 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g53563 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g56901 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0004.g002433 No alias EC_2.7 transferase transferring phosphorus-containing... 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0008.g004138 No alias not classified & original description: CDS=1-2646 0.01 OrthoFinder output from all 47 species
Sacu_v1.1_s0036.g011714 VAC1, ECB2, ATECB2 not classified & original description: CDS=1-2064 0.06 OrthoFinder output from all 47 species
Sacu_v1.1_s0037.g011812 OTP84 not classified & original description: CDS=1-1944 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0040.g012385 No alias not classified & original description: CDS=1-1908 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0051.g013956 No alias not classified & original description: CDS=1-2181 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0055.g014482 No alias not classified & original description: CDS=1-1119 0.06 OrthoFinder output from all 47 species
Sacu_v1.1_s0057.g014767 OTP84 not classified & original description: CDS=399-2006 0.06 OrthoFinder output from all 47 species
Sacu_v1.1_s0080.g017880 No alias not classified & original description: CDS=1-1959 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0110.g020627 No alias not classified & original description: CDS=1-2037 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0133.g022243 No alias not classified & original description: CDS=1-1908 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0151.g023411 REME1 not classified & original description: CDS=1-1494 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0208.g025848 No alias not classified & original description: CDS=1-2184 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0244.g026676 No alias not classified & original description: CDS=1-2475 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s1579.g028098 No alias not classified & original description: CDS=1-249 0.04 OrthoFinder output from all 47 species
Sam_g02656 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g11237 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g14044 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g21956 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g22188 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g29238 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g29293 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g30172 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g35736 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g37160 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g50801 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Smo125795 REME1 Pentatricopeptide repeat-containing protein At2g13600... 0.01 OrthoFinder output from all 47 species
Smo130453 No alias Pentatricopeptide repeat-containing protein At4g13650... 0.02 OrthoFinder output from all 47 species
Smo136134 EMB2261 Pentatricopeptide repeat-containing protein At3g12770... 0.03 OrthoFinder output from all 47 species
Smo136241 EMB2758 Pentatricopeptide repeat-containing protein At2g13600... 0.02 OrthoFinder output from all 47 species
Smo16626 No alias Pentatricopeptide repeat-containing protein At4g16835,... 0.02 OrthoFinder output from all 47 species
Smo92008 No alias Pentatricopeptide repeat-containing protein At3g09040,... 0.04 OrthoFinder output from all 47 species
Solyc02g069500.1.1 Solyc02g069500 Pentatricopeptide repeat-containing protein At4g21300... 0.03 OrthoFinder output from all 47 species
Spa_g04723 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g14314 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g20273 LPA66 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g26699 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g04130 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g05979 No alias ssDNA-binding protein *(OSB) & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g06121 OTP86 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g06630 VAC1, ECB2, ATECB2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g10691 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g12143 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g13178 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g17888 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g21286 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g21929 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g26899 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g43664 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g46234 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e026664_P002 Zm00001e026664 RNA editing factor (BLX) 0.02 OrthoFinder output from all 47 species
Zm00001e029819_P003 CRR22, Zm00001e029819 RNA editing factor (CRR22) 0.02 OrthoFinder output from all 47 species
Zm00001e039026_P001 OTP82, Zm00001e039026 Pentatricopeptide repeat-containing protein At5g48910... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 105 134
IPR002885 Pentatricopeptide_repeat 277 301
IPR002885 Pentatricopeptide_repeat 13 33
IPR002885 Pentatricopeptide_repeat 176 195
No external refs found!