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  5. Aspi01Gene37289.t1

Aspi01Gene37289.t1 (APUM12, PUM12, Aspi01Gene37289)


Aliases : APUM12, PUM12, Aspi01Gene37289

Description : not classified & original description: none


Gene families : OG0000858 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000858_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Aspi01Gene37289.t1
Cluster HCCA: Cluster_32

Target Alias Description ECC score Gene Family Method Actions
Adi_g008224 APUM12, PUM12 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g63300 APUM12, PUM12 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g41521 APUM12, PUM12 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g33255 APUM12, PUM12 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Gb_41365 APUM12, PUM12 Pumilio homolog 12 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
LOC_Os12g31000.1 PUM7, APUM7,... Putative pumilio homolog 7, chloroplastic OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
Lfl_g11286 APUM12, PUM12 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g32957 APUM12, PUM12 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g44911 APUM12, PUM12 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g23500 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g27114 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e039541_P001 APUM12, PUM12,... Pumilio homolog 12 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR001313 Pumilio_RNA-bd_rpt 952 986
IPR001313 Pumilio_RNA-bd_rpt 880 913
IPR001313 Pumilio_RNA-bd_rpt 769 800
IPR001313 Pumilio_RNA-bd_rpt 733 767
IPR001313 Pumilio_RNA-bd_rpt 918 935
IPR001313 Pumilio_RNA-bd_rpt 807 835
IPR001313 Pumilio_RNA-bd_rpt 845 875
No external refs found!