Aliases : Aspi01Gene37396
Description : not classified & original description: none
Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Aspi01Gene37396.t1 | |
| Cluster | HCCA: Cluster_119 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00065p00031420 | evm_27.TU.AmTr_v1... | Pentatricopeptide repeat-containing protein At2g33680... | 0.02 | OrthoFinder output from all 47 species | |
| AT1G47580 | No alias | Pentatricopeptide repeat (PPR) superfamily protein | 0.02 | OrthoFinder output from all 47 species | |
| AT5G44785 | OSB3 | organellar single-stranded DNA binding protein 3 | 0.02 | OrthoFinder output from all 47 species | |
| Adi_g034668 | No alias | not classified & original description: none | 0.01 | OrthoFinder output from all 47 species | |
| Aev_g17771 | No alias | not classified & original description: none | 0.01 | OrthoFinder output from all 47 species | |
| Ala_g10918 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ala_g17609 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ala_g26450 | No alias | not classified & original description: none | 0.01 | OrthoFinder output from all 47 species | |
| Ala_g36536 | OTP84 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Als_g05672 | CRR22 | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Als_g18251 | OTP86 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aob_g17417 | No alias | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Aob_g27844 | REME1 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aob_g28633 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aob_g37552 | No alias | not classified & original description: none | 0.01 | OrthoFinder output from all 47 species | |
| Aob_g40546 | EMB2758 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Azfi_s0004.g008648 | No alias | not classified & original description: CDS=1-2118 | 0.02 | OrthoFinder output from all 47 species | |
| Azfi_s0090.g042642 | No alias | not classified & original description: CDS=39-695 | 0.01 | OrthoFinder output from all 47 species | |
| Azfi_s3130.g114639 | No alias | not classified & original description: CDS=34-2442 | 0.03 | OrthoFinder output from all 47 species | |
| Cba_g75350 | No alias | not classified & original description: none | 0.01 | OrthoFinder output from all 47 species | |
| Ceric.06G074600.1 | Ceric.06G074600 | not classified & original description: pacid=50619733... | 0.01 | OrthoFinder output from all 47 species | |
| Ceric.1Z254100.1 | Ceric.1Z254100 | not classified & original description: pacid=50632850... | 0.01 | OrthoFinder output from all 47 species | |
| Ceric.22G050700.1 | Ceric.22G050700 | not classified & original description: pacid=50614024... | 0.03 | OrthoFinder output from all 47 species | |
| Dcu_g06831 | PTAC9, OSB2 | ssDNA-binding protein *(OSB) & original description: none | 0.01 | OrthoFinder output from all 47 species | |
| Dcu_g21154 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Dcu_g43241 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Dde_g06677 | No alias | not classified & original description: none | 0.01 | OrthoFinder output from all 47 species | |
| Dde_g22297 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dde_g36360 | No alias | ssDNA-binding protein *(OSB) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dde_g36369 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Dde_g49752 | OTP86 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| GSVIVT01000719001 | OSB1 | Cell cycle.organelle machineries.DNA... | 0.03 | OrthoFinder output from all 47 species | |
| GSVIVT01023818001 | CRR28 | Pentatricopeptide repeat-containing protein At4g21065... | 0.01 | OrthoFinder output from all 47 species | |
| LOC_Os03g43420.1 | OSB1, LOC_Os03g43420 | ssDNA-binding protein (OSB) | 0.03 | OrthoFinder output from all 47 species | |
| Len_g18265 | OTP84 | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Len_g44704 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Len_g44793 | No alias | not classified & original description: none | 0.01 | OrthoFinder output from all 47 species | |
| Lfl_g05976 | OTP82 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Lfl_g06230 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Lfl_g07338 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Lfl_g07372 | VAC1, ECB2, ATECB2 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Lfl_g07419 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Lfl_g07656 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Lfl_g07787 | VAC1, ECB2, ATECB2 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| MA_72886g0010 | No alias | Pentatricopeptide repeat-containing protein At5g50390,... | 0.03 | OrthoFinder output from all 47 species | |
| MA_81514g0010 | CRR22 | Pentatricopeptide repeat-containing protein At1g11290,... | 0.02 | OrthoFinder output from all 47 species | |
| MA_82569g0020 | CRR22 | Pentatricopeptide repeat-containing protein At1g11290,... | 0.01 | OrthoFinder output from all 47 species | |
| Msp_g28092 | No alias | ssDNA-binding protein *(OSB) & original description: none | 0.01 | OrthoFinder output from all 47 species | |
| Msp_g31719 | LOI1, MEF11 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Nbi_g08794 | CRR22 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Nbi_g11485 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Nbi_g23882 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Nbi_g27949 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Nbi_g27954 | EMB2758 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Nbi_g27960 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Nbi_g41058 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ore_g06239 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ore_g10372 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ore_g13299 | CRR22 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ore_g26958 | CRR22 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ore_g27115 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ore_g34092 | CRR22 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Pir_g03361 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Pir_g20473 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Pir_g57077 | VAC1, ECB2, ATECB2 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Pir_g58274 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Pir_g63491 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Pnu_g17070 | REME1 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Pnu_g22807 | CRR22 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ppi_g05156 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ppi_g07541 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ppi_g08832 | CRR2 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ppi_g14613 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Ppi_g43670 | CRR22 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ppi_g46357 | CRR22 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ppi_g53945 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ppi_g54649 | CRR2 | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Ppi_g54934 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ppi_g59311 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ppi_g59340 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ppi_g61309 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0003.g001819 | OTP86 | not classified & original description: CDS=1-3381 | 0.03 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0009.g004577 | No alias | not classified & original description: CDS=1-1743 | 0.03 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0037.g011851 | OTP84 | not classified & original description: CDS=1-2175 | 0.03 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0057.g014697 | OTP86 | not classified & original description: CDS=1-2199 | 0.03 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0080.g017928 | No alias | not classified & original description: CDS=112-2919 | 0.03 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0206.g025782 | No alias | not classified & original description: CDS=1-2394 | 0.03 | OrthoFinder output from all 47 species | |
| Sam_g01747 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Sam_g13764 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Sam_g18597 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Sam_g26490 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Sam_g33428 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Smo98551 | No alias | Pentatricopeptide repeat-containing protein At4g14820... | 0.01 | OrthoFinder output from all 47 species | |
| Solyc04g076800.3.1 | CRR22, Solyc04g076800 | Pentatricopeptide repeat-containing protein At4g13650... | 0.03 | OrthoFinder output from all 47 species | |
| Spa_g06014 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Spa_g29657 | No alias | ssDNA-binding protein *(OSB) & original description: none | 0.01 | OrthoFinder output from all 47 species | |
| Spa_g43840 | OTP84 | not classified & original description: none | 0.01 | OrthoFinder output from all 47 species | |
| Tin_g05629 | OTP84 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Tin_g14871 | OTP86 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Tin_g15629 | OTP84 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Tin_g30218 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Zm00001e003605_P001 | DOT4, Zm00001e003605 | Pentatricopeptide repeat-containing protein DOT4,... | 0.03 | OrthoFinder output from all 47 species | |
| Zm00001e007462_P001 | Zm00001e007462 | Putative pentatricopeptide repeat-containing protein... | 0.01 | OrthoFinder output from all 47 species | |
| Zm00001e011467_P004 | emb1899, EMB175,... | Pentatricopeptide repeat-containing protein At5g03800... | 0.03 | OrthoFinder output from all 47 species | |
| Zm00001e012422_P001 | OSB1, Zm00001e012422 | ssDNA-binding protein (OSB) | 0.03 | OrthoFinder output from all 47 species | |
| Zm00001e034445_P001 | LPA66, Zm00001e034445 | Pentatricopeptide repeat-containing protein At5g48910... | 0.02 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No Predicted GO terms available for this sequence |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR002885 | Pentatricopeptide_repeat | 505 | 523 |
| IPR002885 | Pentatricopeptide_repeat | 100 | 121 |
| IPR002885 | Pentatricopeptide_repeat | 527 | 566 |
| IPR002885 | Pentatricopeptide_repeat | 124 | 170 |
| IPR002885 | Pentatricopeptide_repeat | 224 | 271 |
| IPR002885 | Pentatricopeptide_repeat | 426 | 474 |
| IPR002885 | Pentatricopeptide_repeat | 325 | 373 |
| No external refs found! |
