Aspi01Gene38222.t1 (Aspi01Gene38222)

Aliases : Aspi01Gene38222

Description : not classified & original description: none

Gene families : OG0000184 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000184_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Aspi01Gene38222.t1

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00025p00202360	evm_27.TU.AmTr_v1...	Probable pre-mRNA-splicing factor ATP-dependent RNA...	0.02	OrthoFinder output from all 47 species
Ehy_g09304	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Ehy_g18759	No alias	RNA helicase Prp43 of Intron-Lariat Spliceosome complex...	0.04	OrthoFinder output from all 47 species
Nbi_g15286	No alias	RNA helicase Prp43 of Intron-Lariat Spliceosome complex...	0.04	OrthoFinder output from all 47 species
Ppi_g04698	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Sam_g29503	No alias	RNA helicase *(Prp22) & original description: none	0.02	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	IEA	Interproscan
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0004386	helicase activity	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
MF	GO:0005524	ATP binding	IEA	Interproscan
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:0140640	catalytic activity, acting on a nucleic acid	None	Extended
MF	GO:0140657	ATP-dependent activity	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

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Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR011545	DEAD/DEAH_box_helicase_dom	289	440
IPR007502	Helicase-assoc_dom	642	730
IPR011709	DEAD-box_helicase_OB_fold	788	864
IPR001650	Helicase_C	483	612

External Links

No external refs found!