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  5. Aspi01Gene40088.t1

Aspi01Gene40088.t1 (Aspi01Gene40088)


Aliases : Aspi01Gene40088

Description : calcium sensor *(CML) & original description: none


Gene families : OG0000383 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000383_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Aspi01Gene40088.t1
Cluster HCCA: Cluster_221

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00053p00122010 evm_27.TU.AmTr_v1... Probable calcium-binding protein CML35 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
AT1G73630 No alias EF hand calcium-binding protein family 0.08 OrthoFinder output from all 47 species
Dac_g10925 No alias calcium sensor *(CML) & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g03464 TCH3, ATCAL4 calcium sensor *(CML) & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g06703 No alias calcium sensor *(CML) & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g09860 No alias calcium sensor *(CML) & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g10805 No alias calcium sensor *(CML) & original description: none 0.02 OrthoFinder output from all 47 species
Gb_37768 No alias Probable calcium-binding protein CML25 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
LOC_Os11g04560.1 LOC_Os11g04560 Probable calcium-binding protein CML36 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
MA_12364g0010 No alias Probable calcium-binding protein CML25 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
Msp_g20815 No alias calcium sensor *(CML) & original description: none 0.01 OrthoFinder output from all 47 species
Sacu_v1.1_s0291.g027172 No alias calcium sensor *(CML) & original description: CDS=1-882 0.01 OrthoFinder output from all 47 species
Zm00001e026863_P001 Zm00001e026863 Probable calcium-binding protein CML10 OS=Oryza sativa... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005509 calcium ion binding IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR002048 EF_hand_dom 123 182
IPR002048 EF_hand_dom 40 99
No external refs found!