Aspi01Gene40204.t1 (Aspi01Gene40204)

Aliases : Aspi01Gene40204

Description : SBP-type transcription factor & original description: none

Gene families : OG0000121 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000121_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Aspi01Gene40204.t1
Cluster	HCCA: Cluster_111

Target	Alias	Description	ECC score	Gene Family Method
Cre07.g325738	SPL7, ATSPL7	RNA biosynthesis.transcriptional activation.SBP...	0.01	OrthoFinder output from all 47 species
GSVIVT01021087001	SPL3	RNA biosynthesis.transcriptional activation.SBP...	0.03	OrthoFinder output from all 47 species
LOC_Os06g49010.4	SPL2, LOC_Os06g49010	transcription factor (SBP)	0.02	OrthoFinder output from all 47 species
Msp_g32603	No alias	SBP-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Pnu_g03154	SPL8	SBP-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Ppi_g18143	SPL3	SBP-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Sacu_v1.1_s0036.g011736	SPL2	SBP-type transcription factor & original description:...	0.03	OrthoFinder output from all 47 species
Tin_g13303	SPL7, ATSPL7	SBP-type transcription factor & original description: none	0.04	OrthoFinder output from all 47 species
Zm00001e003546_P002	AtSPL9, SPL9,...	transcription factor (SBP)	0.03	OrthoFinder output from all 47 species
Zm00001e041526_P001	SPL3, Zm00001e041526	transcription factor (SBP)	0.02	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

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Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR004333	SBP_dom	127	200
IPR004333	SBP_dom	351	424

External Links

No external refs found!