Aspi01Gene41815.t1 (EXPA16, ATHEXP ALPHA...)


Aliases : EXPA16, ATHEXP ALPHA 1.7, ATEXP16, EXP16, ATEXPA16, Aspi01Gene41815

Description : alpha-class expansin & original description: none


Gene families : OG0000032 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Aspi01Gene41815.t1

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00001p00240270 ATEXPL2, EXPL2,... Cell wall.cell wall proteins.expansins.alpha-like-type expansin 0.02 OrthoFinder output from all 47 species
AT1G12560 ATEXP7, EXPA7,... expansin A7 0.02 OrthoFinder output from all 47 species
AT1G62980 EXPA18, EXP18,... expansin A18 0.03 OrthoFinder output from all 47 species
AT3G45960 ATEXLA3, EXPL3,... expansin-like A3 0.01 OrthoFinder output from all 47 species
AT5G02260 EXP9, EXPA9,... expansin A9 0.02 OrthoFinder output from all 47 species
AT5G39260 EXPA21, EXP21,... expansin A21 0.03 OrthoFinder output from all 47 species
AT5G39300 ATEXPA25,... expansin A25 0.03 OrthoFinder output from all 47 species
Als_g11063 EXPA16, ATHEXP... alpha-class expansin & original description: none 0.03 OrthoFinder output from all 47 species
Als_g38607 EXPA8, ATHEXP... alpha-class expansin & original description: none 0.03 OrthoFinder output from all 47 species
Als_g39091 ATEXPA10,... alpha-class expansin & original description: none 0.05 OrthoFinder output from all 47 species
Aob_g18952 ATEXPA3, EXP3,... alpha-class expansin & original description: none 0.04 OrthoFinder output from all 47 species
Aob_g20801 ATEXPA10,... alpha-class expansin & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g32812 ATEXPA10,... alpha-class expansin & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g35135 ATEXPA1, EXP1,... alpha-class expansin & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene00435.t1 EXP15, ATEXPA15,... alpha-class expansin & original description: none 0.05 OrthoFinder output from all 47 species
Aspi01Gene45675.t1 ATEXPA10,... alpha-class expansin & original description: none 0.05 OrthoFinder output from all 47 species
Azfi_s0041.g026744 EXPA16, ATHEXP... alpha-class expansin & original description: CDS=9-821 0.03 OrthoFinder output from all 47 species
Azfi_s0206.g057815 EXPA16, ATHEXP... alpha-class expansin & original description: CDS=254-1036 0.04 OrthoFinder output from all 47 species
Azfi_s0578.g078256 EXPA16, ATHEXP... alpha-class expansin & original description: CDS=388-1158 0.03 OrthoFinder output from all 47 species
Ceric.1Z063100.1 ATEXPA4, ATEXP4,... alpha-class expansin & original description:... 0.03 OrthoFinder output from all 47 species
Ceric.32G061800.1 ATEXPA4, ATEXP4,... alpha-class expansin & original description:... 0.04 OrthoFinder output from all 47 species
Ceric.37G054100.1 ATEXPA3, EXP3,... alpha-class expansin & original description:... 0.03 OrthoFinder output from all 47 species
GSVIVT01028215001 ATHEXP ALPHA... Cell wall.cell wall proteins.expansins.alpha-type expansin 0.03 OrthoFinder output from all 47 species
GSVIVT01028474001 ATEXPA25,... Cell wall.cell wall proteins.expansins.alpha-type expansin 0.02 OrthoFinder output from all 47 species
Gb_10700 ATHEXP BETA 3.1,... beta-like-class expansin 0.03 OrthoFinder output from all 47 species
LOC_Os01g14650.1 ATEXPA1, EXP1,... alpha-class expansin 0.02 OrthoFinder output from all 47 species
LOC_Os02g44108.1 ATHEXP BETA 1.4,... Expansin-B11 OS=Oryza sativa subsp. japonica... 0.02 OrthoFinder output from all 47 species
LOC_Os03g06010.1 ATEXPA11, ATHEXP... alpha-class expansin 0.02 OrthoFinder output from all 47 species
LOC_Os03g21820.1 EXPA8, ATHEXP... alpha-class expansin 0.03 OrthoFinder output from all 47 species
LOC_Os03g25990.1 EXP15, ATEXPA15,... alpha-class expansin 0.02 OrthoFinder output from all 47 species
LOC_Os04g15840.1 LOC_Os04g15840 alpha-class expansin 0.03 OrthoFinder output from all 47 species
LOC_Os05g39990.1 LOC_Os05g39990 alpha-class expansin 0.02 OrthoFinder output from all 47 species
LOC_Os06g50960.1 ATEXPL2, EXPL2,... Expansin-like A4 OS=Oryza sativa subsp. japonica... 0.02 OrthoFinder output from all 47 species
Lfl_g28510 ATEXPL2, EXPL2,... alpha-like-class expansin & original description: none 0.03 OrthoFinder output from all 47 species
MA_184474g0010 EXPA8, ATHEXP... alpha-class expansin 0.02 OrthoFinder output from all 47 species
MA_229510g0010 EXPA2, ATHEXP... Expansin-A2 OS=Arabidopsis thaliana... 0.01 OrthoFinder output from all 47 species
MA_41212g0010 ATHEXP BETA 3.1,... beta-like-class expansin 0.03 OrthoFinder output from all 47 species
Mp1g24230.1 EXP15, ATEXPA15,... alpha-class expansin 0.02 OrthoFinder output from all 47 species
Ore_g20453 ATEXPA10,... alpha-class expansin & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g30072 ATEXPA4, ATEXP4,... alpha-class expansin & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g34219 ATEXPA3, EXP3,... alpha-class expansin & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g43367 ATEXPA3, EXP3,... alpha-class expansin & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g06275 ATEXPA10,... alpha-class expansin & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g19759 EXPA16, ATHEXP... alpha-class expansin & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g24739 EXP15, ATEXPA15,... alpha-class expansin & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g30056 ATEXPA4, ATEXP4,... alpha-class expansin & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g31444 EXPA16, ATHEXP... alpha-class expansin & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0014.g006211 ATEXPA4, ATEXP4,... alpha-class expansin & original description: CDS=682-1482 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0024.g009021 ATHEXP ALPHA... not classified & original description: CDS=1-1083 0.03 OrthoFinder output from all 47 species
Sam_g06188 No alias alpha-class expansin & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g28732 No alias alpha-class expansin & original description: none 0.02 OrthoFinder output from all 47 species
Smo143857 ATEXPA3, EXP3,... Cell wall.cell wall proteins.expansins.alpha-type expansin 0.02 OrthoFinder output from all 47 species
Smo231226 ATEXPA10,... Cell wall.cell wall proteins.expansins.alpha-type expansin 0.02 OrthoFinder output from all 47 species
Smo409954 EXPA8, ATHEXP... Cell wall.cell wall proteins.expansins.alpha-type expansin 0.03 OrthoFinder output from all 47 species
Smo75237 ATEXP7, EXPA7,... Cell wall.cell wall proteins.expansins.alpha-type expansin 0.03 OrthoFinder output from all 47 species
Smo90935 EXPA16, ATHEXP... Cell wall.cell wall proteins.expansins.alpha-type expansin 0.04 OrthoFinder output from all 47 species
Smo91129 EXP15, ATEXPA15,... Cell wall.cell wall proteins.expansins.alpha-type expansin 0.02 OrthoFinder output from all 47 species
Solyc02g088100.3.1 ATEXPA10,... alpha-class expansin 0.03 OrthoFinder output from all 47 species
Solyc06g060970.2.1 ATHEXP BETA 3.1,... beta-like-class expansin 0.04 OrthoFinder output from all 47 species
Solyc08g007090.3.1 Solyc08g007090 Expansin-like B1 OS=Oryza sativa subsp. japonica... 0.03 OrthoFinder output from all 47 species
Solyc08g077330.3.1 ATHEXP BETA 3.1,... beta-like-class expansin 0.04 OrthoFinder output from all 47 species
Solyc08g077910.3.1 ATHEXP BETA 3.1,... beta-like-class expansin 0.03 OrthoFinder output from all 47 species
Spa_g17657 ATEXPA10,... alpha-class expansin & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g25448 ATEXPA3, EXP3,... alpha-class expansin & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g32551 EXP9, EXPA9,... alpha-class expansin & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g30401 EXPA16, ATHEXP... alpha-class expansin & original description: none 0.01 OrthoFinder output from all 47 species
Zm00001e000429_P001 ATEXPA11, ATHEXP... alpha-class expansin 0.02 OrthoFinder output from all 47 species
Zm00001e004713_P001 ATEXPA11, ATHEXP... alpha-class expansin 0.03 OrthoFinder output from all 47 species
Zm00001e004714_P001 ATEXPA11, ATHEXP... alpha-class expansin 0.02 OrthoFinder output from all 47 species
Zm00001e004720_P001 ATEXPA11, ATHEXP... alpha-class expansin 0.02 OrthoFinder output from all 47 species
Zm00001e017334_P001 ATEXPA10,... alpha-class expansin 0.03 OrthoFinder output from all 47 species
Zm00001e036860_P001 ATHEXP BETA 1.4,... Putative expansin-B14 OS=Oryza sativa subsp. japonica... 0.02 OrthoFinder output from all 47 species
Zm00001e037578_P001 ATEXPA20,... alpha-class expansin 0.02 OrthoFinder output from all 47 species
Zm00001e038997_P001 ATEXPA11, ATHEXP... alpha-class expansin 0.02 OrthoFinder output from all 47 species
Zm00001e040578_P001 ATEXPA11, ATHEXP... alpha-class expansin 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR007117 Expansin_CBD 157 233
IPR009009 RlpA-like_DPBB 64 144
No external refs found!