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  5. Aspi01Gene42894.t1

Aspi01Gene42894.t1 (ATEXPA10, AT-EXP10,...)


Aliases : ATEXPA10, AT-EXP10, ATEXP10, EXPA10, EXP10, ATHEXP ALPHA 1.1, Aspi01Gene42894

Description : alpha-class expansin & original description: none


Gene families : OG0000032 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Aspi01Gene42894.t1

Target Alias Description ECC score Gene Family Method Actions
AT4G38210 ATEXPA20,... expansin A20 0.02 OrthoFinder output from all 47 species
AT5G02260 EXP9, EXPA9,... expansin A9 0.02 OrthoFinder output from all 47 species
Adi_g042098 EXP5, ATHEXP... not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g01552 EXP15, ATEXPA15,... alpha-class expansin & original description: none 0.04 OrthoFinder output from all 47 species
Als_g02221 EXP15, ATEXPA15,... alpha-class expansin & original description: none 0.03 OrthoFinder output from all 47 species
Als_g03581 ATEXPA10,... alpha-class expansin & original description: none 0.03 OrthoFinder output from all 47 species
Als_g14628 EXPA2, ATHEXP... alpha-class expansin & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g20801 ATEXPA10,... alpha-class expansin & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene14343.t1 ATEXPA4, ATEXP4,... alpha-class expansin & original description: none 0.05 OrthoFinder output from all 47 species
Azfi_s0041.g026744 EXPA16, ATHEXP... alpha-class expansin & original description: CDS=9-821 0.03 OrthoFinder output from all 47 species
Azfi_s1837.g107352 EXPA8, ATHEXP... not classified & original description: CDS=1-687 0.03 OrthoFinder output from all 47 species
Ceric.01G000500.1 EXPA16, ATHEXP... alpha-class expansin & original description:... 0.04 OrthoFinder output from all 47 species
Ceric.02G091400.1 EXP15, ATEXPA15,... alpha-class expansin & original description:... 0.05 OrthoFinder output from all 47 species
Dac_g01318 EXPA16, ATHEXP... alpha-class expansin & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g16853 ATEXPA10,... alpha-class expansin & original description: none 0.05 OrthoFinder output from all 47 species
Dac_g37896 EXP15, ATEXPA15,... not classified & original description: none 0.01 OrthoFinder output from all 47 species
Dcu_g06200 EXPA8, ATHEXP... alpha-class expansin & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01011437001 ATEXPA10,... Cell wall.cell wall proteins.expansins.alpha-type expansin 0.03 OrthoFinder output from all 47 species
GSVIVT01023919001 ATEXPL2, EXPL2,... Cell wall.cell wall proteins.expansins.alpha-like-type expansin 0.03 OrthoFinder output from all 47 species
Gb_10700 ATHEXP BETA 3.1,... beta-like-class expansin 0.01 OrthoFinder output from all 47 species
LOC_Os03g01610.1 ATHEXP BETA 1.4,... Expansin-B1 OS=Oryza sativa subsp. japonica... 0.02 OrthoFinder output from all 47 species
LOC_Os03g01650.1 ATHEXP BETA 1.4,... Expansin-B1 OS=Oryza sativa subsp. japonica... 0.02 OrthoFinder output from all 47 species
LOC_Os03g04020.1 ATEXLA1, EXPL1,... alpha-like-class expansin 0.02 OrthoFinder output from all 47 species
LOC_Os04g46630.1 LOC_Os04g46630 Expansin-B15 OS=Oryza sativa subsp. japonica... 0.02 OrthoFinder output from all 47 species
LOC_Os10g40090.1 ATHEXP BETA 1.4,... Expansin-B9 OS=Oryza sativa subsp. japonica... 0.03 OrthoFinder output from all 47 species
LOC_Os12g36040.1 EXP9, EXPA9,... alpha-class expansin 0.03 OrthoFinder output from all 47 species
Len_g18380 ATEXPA11, ATHEXP... alpha-class expansin & original description: none 0.03 OrthoFinder output from all 47 species
Len_g22081 ATEXPA10,... alpha-class expansin & original description: none 0.07 OrthoFinder output from all 47 species
MA_10433559g0020 ATEXPA11, ATHEXP... alpha-class expansin 0.03 OrthoFinder output from all 47 species
MA_134413g0010 ATHEXP ALPHA... alpha-class expansin 0.03 OrthoFinder output from all 47 species
MA_172610g0010 EXPA8, ATHEXP... alpha-class expansin 0.01 OrthoFinder output from all 47 species
MA_229510g0010 EXPA2, ATHEXP... Expansin-A2 OS=Arabidopsis thaliana... 0.01 OrthoFinder output from all 47 species
Sacu_v1.1_s0001.g000532 ATEXPA4, ATEXP4,... alpha-class expansin & original description: CDS=37-810 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0007.g003482 EXPA8, ATHEXP... alpha-class expansin & original description: CDS=15-929 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0014.g006211 ATEXPA4, ATEXP4,... alpha-class expansin & original description: CDS=682-1482 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0024.g009021 ATHEXP ALPHA... not classified & original description: CDS=1-1083 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0103.g019980 ATEXPA4, ATEXP4,... alpha-class expansin & original description: CDS=1-819 0.03 OrthoFinder output from all 47 species
Solyc02g088100.3.1 ATEXPA10,... alpha-class expansin 0.02 OrthoFinder output from all 47 species
Tin_g30401 EXPA16, ATHEXP... alpha-class expansin & original description: none 0.01 OrthoFinder output from all 47 species
Zm00001e002243_P002 ATEXLA3, EXPL3,... no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Zm00001e002332_P001 ATHEXP BETA 1.4,... Expansin-B4 OS=Oryza sativa subsp. japonica... 0.03 OrthoFinder output from all 47 species
Zm00001e005019_P001 ATHEXP BETA 1.4,... Expansin-B12 OS=Oryza sativa subsp. japonica... 0.02 OrthoFinder output from all 47 species
Zm00001e023169_P003 ATHEXP BETA 1.1,... Putative expansin-B14 OS=Oryza sativa subsp. japonica... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR009009 RlpA-like_DPBB 81 166
IPR007117 Expansin_CBD 177 254
No external refs found!