Aspi01Gene43833.t1 (CRR22, Aspi01Gene43833)


Aliases : CRR22, Aspi01Gene43833

Description : not classified & original description: none


Gene families : OG0000009 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Aspi01Gene43833.t1

Target Alias Description ECC score Gene Family Method Actions
Aev_g24238 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g29145 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g33234 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g48480 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g05058 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g48470 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g18248 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g37429 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g38720 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g56892 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g62153 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g67404 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene25053.t1 Aspi01Gene25053 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene43084.t1 Aspi01Gene43084 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene44785.t1 Aspi01Gene44785 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene49991.t1 Aspi01Gene49991 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene60028.t1 Aspi01Gene60028 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g10590 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g15950 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g16378 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g25014 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g32000 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g32930 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g37432 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g38793 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g75824 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g75857 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g18112 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dac_g19973 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g21971 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g47004 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g14985 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g19897 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Gb_40853 No alias Retrovirus-related Pol polyprotein from transposon TNT... 0.03 OrthoFinder output from all 47 species
Len_g06736 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g30200 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Len_g30278 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Len_g31569 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Len_g36173 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g42626 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g47847 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g56383 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g27581 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g41918 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g13270 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g05067 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g09088 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g38977 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g62172 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g66333 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g09374 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g19475 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g55693 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g06671 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g17804 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g48216 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g09460 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g52228 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g26514 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA Interproscan
MF GO:0008270 zinc ion binding IEA Interproscan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 860 890
IPR002885 Pentatricopeptide_repeat 999 1020
IPR002885 Pentatricopeptide_repeat 832 858
IPR002885 Pentatricopeptide_repeat 923 971
IPR002885 Pentatricopeptide_repeat 721 769
IPR001878 Znf_CCHC 172 188
IPR025724 GAG-pre-integrase_dom 248 318
No external refs found!