Aspi01Gene43949.t1 (OTP84, Aspi01Gene43949)


Aliases : OTP84, Aspi01Gene43949

Description : not classified & original description: none


Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Aspi01Gene43949.t1

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00077p00031710 evm_27.TU.AmTr_v1... Pentatricopeptide repeat-containing protein At2g27610... 0.03 OrthoFinder output from all 47 species
AT1G31920 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.02 OrthoFinder output from all 47 species
AT3G22150 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.03 OrthoFinder output from all 47 species
Adi_g017104 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g018634 OSB1 ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g082266 OTP82 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g15170 No alias ssDNA-binding protein *(OSB) & original description: none 0.04 OrthoFinder output from all 47 species
Aev_g48329 OSB3 ssDNA-binding protein *(OSB) & original description: none 0.01 OrthoFinder output from all 47 species
Als_g05010 CRR22 not classified & original description: none 0.01 OrthoFinder output from all 47 species
Als_g13525 CRR22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g20391 EMB2758 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Als_g22355 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g07355 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g12691 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g14243 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g16798 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g19060 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g37979 CRR22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aob_g40546 EMB2758 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g43028 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g16384 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Aop_g17248 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g39230 OTP84 not classified & original description: none 0.01 OrthoFinder output from all 47 species
Azfi_s0090.g042642 No alias not classified & original description: CDS=39-695 0.01 OrthoFinder output from all 47 species
Cba_g06022 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g06290 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g20773 EMB2758 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g35519 No alias ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g67760 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g67802 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g67849 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g76849 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g77837 OTP86 ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.06G062800.1 Ceric.06G062800 not classified & original description: pacid=50620833... 0.03 OrthoFinder output from all 47 species
Ceric.1Z254100.1 Ceric.1Z254100 not classified & original description: pacid=50632850... 0.01 OrthoFinder output from all 47 species
Cpa|evm.model.tig00021035.24 No alias Pentatricopeptide repeat-containing protein At1g63080,... 0.01 OrthoFinder output from all 47 species
Dac_g12138 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g06433 CRR22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g26799 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g05389 CRR22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g06719 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Dde_g09864 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Dde_g12890 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g15725 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Dde_g16466 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g16894 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g16907 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g38510 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g47958 OTP84 not classified & original description: none 0.04 OrthoFinder output from all 47 species
GSVIVT01000178001 No alias RNA processing.organelle machineries.RNA... 0.03 OrthoFinder output from all 47 species
LOC_Os01g10800.1 DOT4, LOC_Os01g10800 Pentatricopeptide repeat-containing protein DOT4,... 0.03 OrthoFinder output from all 47 species
LOC_Os02g50280.1 CRR22, LOC_Os02g50280 Pentatricopeptide repeat-containing protein At1g11290,... 0.03 OrthoFinder output from all 47 species
LOC_Os03g04390.1 LOC_Os03g04390 Pentatricopeptide repeat-containing protein At4g35130,... 0.02 OrthoFinder output from all 47 species
LOC_Os03g43420.1 OSB1, LOC_Os03g43420 ssDNA-binding protein (OSB) 0.03 OrthoFinder output from all 47 species
Len_g17531 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Len_g18068 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g18533 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g18947 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Len_g21090 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Len_g24715 OTP86 not classified & original description: none 0.07 OrthoFinder output from all 47 species
Len_g28860 EMB2758 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Len_g34035 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Len_g54307 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g04163 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g05719 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g06713 EMB2758 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g06743 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g07419 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
MA_10164206g0010 CRR22 Pentatricopeptide repeat-containing protein At1g11290,... 0.02 OrthoFinder output from all 47 species
MA_525914g0010 CRR22 Pentatricopeptide repeat-containing protein At1g11290,... 0.02 OrthoFinder output from all 47 species
MA_94165g0010 CRR22 Pentatricopeptide repeat-containing protein At1g11290,... 0.02 OrthoFinder output from all 47 species
Msp_g04467 OTP84 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Msp_g12189 EMB2758 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g23028 OSB4 ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g28692 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Msp_g28772 No alias ssDNA-binding protein *(OSB) & original description: none 0.01 OrthoFinder output from all 47 species
Msp_g31719 LOI1, MEF11 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Msp_g36814 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Msp_g41395 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Msp_g46446 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Msp_g48531 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g05483 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g06230 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g25474 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Nbi_g32352 EMB2758 not classified & original description: none 0.01 OrthoFinder output from all 47 species
Nbi_g38345 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Ore_g02390 EMB2758 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g03052 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g09876 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g26690 VAC1, ECB2, ATECB2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g33905 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Ore_g45078 CRR22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g57548 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g57706 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g03458 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Pnu_g15487 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g20310 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g23599 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g30070 CRR2 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g04620 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g04713 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g53563 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0017.g007299 No alias not classified & original description: CDS=1-3327 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0096.g019397 No alias not classified & original description: CDS=1-2220 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0244.g026675 No alias not classified & original description: CDS=1-1575 0.03 OrthoFinder output from all 47 species
Sam_g02933 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g03180 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g03385 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g07617 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g11237 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g13567 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g15980 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g16013 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g28579 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g29285 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Sam_g30171 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g35189 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Smo81279 EMB2261 Pentatricopeptide repeat-containing protein At4g02750... 0.03 OrthoFinder output from all 47 species
Solyc01g081020.1.1 Solyc01g081020 RNA editing factor (OTP80) 0.03 OrthoFinder output from all 47 species
Solyc09g065840.3.1 OSB1, Solyc09g065840 ssDNA-binding protein (OSB) 0.02 OrthoFinder output from all 47 species
Spa_g56533 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Spa_g57006 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g09800 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Tin_g11463 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g17148 VAC1, ECB2, ATECB2 not classified & original description: none 0.01 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0008270 zinc ion binding IEA Interproscan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 174 196
IPR002885 Pentatricopeptide_repeat 74 97
IPR002885 Pentatricopeptide_repeat 100 147
IPR002885 Pentatricopeptide_repeat 2 45
IPR032867 DYW_dom 314 361
IPR046848 E_motif 219 281
No external refs found!