Aspi01Gene45256.t1 (EMB2758, Aspi01Gene45256)


Aliases : EMB2758, Aspi01Gene45256

Description : not classified & original description: none


Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Aspi01Gene45256.t1
Cluster HCCA: Cluster_137

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00019p00093260 SLO1,... Pentatricopeptide repeat-containing protein At2g22410,... 0.03 OrthoFinder output from all 47 species
AMTR_s00103p00160020 evm_27.TU.AmTr_v1... Pentatricopeptide repeat-containing protein DOT4,... 0.03 OrthoFinder output from all 47 species
AT3G22690 No alias CONTAINS InterPro DOMAIN/s: Protein of unknown function... 0.03 OrthoFinder output from all 47 species
Adi_g004364 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g005655 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g034232 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g034754 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Adi_g036520 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g113029 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g12481 OTP82 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g12663 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g38002 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g19184 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g28097 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g28460 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g05937 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g08457 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g09073 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g27584 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aob_g27921 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g28230 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g28679 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g28686 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g31935 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g37094 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g37344 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g37584 OTP86 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aob_g37588 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aob_g37598 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g06679 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g16814 No alias ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g21870 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene02301.t1 Aspi01Gene02301 ssDNA-binding protein *(OSB) & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene02568.t1 Aspi01Gene02568 ssDNA-binding protein *(OSB) & original description: none 0.05 OrthoFinder output from all 47 species
Aspi01Gene16549.t1 EMB2261, Aspi01Gene16549 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aspi01Gene19500.t2 Aspi01Gene19500 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Azfi_s0072.g036890 No alias not classified & original description: CDS=1-1833 0.03 OrthoFinder output from all 47 species
Azfi_s0093.g043353 No alias not classified & original description: CDS=1-2244 0.03 OrthoFinder output from all 47 species
Azfi_s0095.g043642 No alias not classified & original description: CDS=144-2255 0.04 OrthoFinder output from all 47 species
Cba_g06233 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g06290 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g07249 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g07325 VAC1, ECB2, ATECB2 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Cba_g07472 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g07786 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g11192 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g11618 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Cba_g16658 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g33383 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g38342 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g67679 CRR2 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g67898 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g67906 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.02G080300.1 Ceric.02G080300 not classified & original description: pacid=50586181... 0.03 OrthoFinder output from all 47 species
Ceric.04G010500.1 Ceric.04G010500 not classified & original description: pacid=50631555... 0.04 OrthoFinder output from all 47 species
Ceric.06G036400.1 Ceric.06G036400 not classified & original description: pacid=50619976... 0.03 OrthoFinder output from all 47 species
Ceric.07G041800.1 Ceric.07G041800 not classified & original description: pacid=50626255... 0.03 OrthoFinder output from all 47 species
Ceric.09G092300.1 Ceric.09G092300 not classified & original description: pacid=50588334... 0.04 OrthoFinder output from all 47 species
Ceric.11G040400.1 Ceric.11G040400 not classified & original description: pacid=50596720... 0.03 OrthoFinder output from all 47 species
Ceric.11G040900.1 Ceric.11G040900 not classified & original description: pacid=50596742... 0.04 OrthoFinder output from all 47 species
Ceric.13G031800.1 Ceric.13G031800 not classified & original description: pacid=50636627... 0.04 OrthoFinder output from all 47 species
Ceric.1Z048400.1 Ceric.1Z048400 not classified & original description: pacid=50571131... 0.03 OrthoFinder output from all 47 species
Ceric.20G051600.1 Ceric.20G051600 not classified & original description: pacid=50567347... 0.03 OrthoFinder output from all 47 species
Ceric.22G068300.1 Ceric.22G068300 not classified & original description: pacid=50614812... 0.03 OrthoFinder output from all 47 species
Ceric.29G055100.1 Ceric.29G055100 not classified & original description: pacid=50625141... 0.03 OrthoFinder output from all 47 species
Ceric.34G069900.1 Ceric.34G069900 not classified & original description: pacid=50624195... 0.03 OrthoFinder output from all 47 species
Ceric.39G043600.1 Ceric.39G043600 not classified & original description: pacid=50582616... 0.03 OrthoFinder output from all 47 species
Dac_g25266 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g27049 No alias ssDNA-binding protein *(OSB) & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g35674 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g05749 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g07698 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g26044 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g16079 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g17670 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g49994 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g50877 REME1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01000072001 No alias Pentatricopeptide repeat-containing protein At3g05340... 0.02 OrthoFinder output from all 47 species
GSVIVT01003453001 OTP80 RNA processing.organelle machineries.RNA... 0.02 OrthoFinder output from all 47 species
GSVIVT01007811001 No alias Pentatricopeptide repeat-containing protein At3g22690... 0.02 OrthoFinder output from all 47 species
GSVIVT01008015001 No alias Pentatricopeptide repeat-containing protein At1g74600,... 0.03 OrthoFinder output from all 47 species
GSVIVT01009866001 No alias Pentatricopeptide repeat-containing protein At1g25360... 0.03 OrthoFinder output from all 47 species
GSVIVT01010654001 No alias Pentatricopeptide repeat-containing protein At4g38010... 0.02 OrthoFinder output from all 47 species
GSVIVT01015233001 EMB2261 Pentatricopeptide repeat-containing protein DOT4,... 0.03 OrthoFinder output from all 47 species
GSVIVT01015521001 No alias Pentatricopeptide repeat-containing protein At4g32430,... 0.02 OrthoFinder output from all 47 species
GSVIVT01017075001 OTP82 Pentatricopeptide repeat-containing protein At3g12770... 0.02 OrthoFinder output from all 47 species
GSVIVT01021246001 DOT4 Pentatricopeptide repeat-containing protein DOT4,... 0.03 OrthoFinder output from all 47 species
GSVIVT01023644001 No alias Pentatricopeptide repeat-containing protein At4g30700... 0.03 OrthoFinder output from all 47 species
GSVIVT01024915001 No alias Pentatricopeptide repeat-containing protein At5g16860... 0.02 OrthoFinder output from all 47 species
GSVIVT01028697001 EMB2261 Pentatricopeptide repeat-containing protein At3g49170,... 0.02 OrthoFinder output from all 47 species
GSVIVT01030248001 No alias Putative pentatricopeptide repeat-containing protein... 0.03 OrthoFinder output from all 47 species
GSVIVT01033389001 No alias Pentatricopeptide repeat-containing protein At4g13650... 0.02 OrthoFinder output from all 47 species
GSVIVT01033837001 No alias Putative pentatricopeptide repeat-containing protein... 0.02 OrthoFinder output from all 47 species
GSVIVT01035837001 LPA66 Pentatricopeptide repeat-containing protein At4g21065... 0.02 OrthoFinder output from all 47 species
GSVIVT01038381001 No alias Pentatricopeptide repeat-containing protein At4g02750... 0.02 OrthoFinder output from all 47 species
Gb_19040 No alias Putative pentatricopeptide repeat-containing protein... 0.02 OrthoFinder output from all 47 species
LOC_Os06g41040.1 LOC_Os06g41040 Putative pentatricopeptide repeat-containing protein... 0.02 OrthoFinder output from all 47 species
LOC_Os09g07780.1 OTP84, LOC_Os09g07780 Pentatricopeptide repeat-containing protein At3g57430,... 0.02 OrthoFinder output from all 47 species
Len_g04697 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g18212 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g19020 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g20943 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g23208 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g24214 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g26557 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g44130 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Len_g54471 LPA66 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g06180 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g06721 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g07430 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g07805 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g07835 OTP84 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g32670 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g37517 EMB2261 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g37537 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g38215 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
MA_53781g0010 No alias Pentatricopeptide repeat-containing protein At1g11290,... 0.02 OrthoFinder output from all 47 species
MA_863836g0010 No alias Pentatricopeptide repeat-containing protein At2g13600... 0.02 OrthoFinder output from all 47 species
Msp_g14913 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g28692 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Msp_g34226 EMB2758 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g34481 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g57343 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g05592 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g06965 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g14992 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g29582 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g53359 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g58173 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0008.g004138 No alias not classified & original description: CDS=1-2646 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0012.g005517 CRR22 not classified & original description: CDS=1-2004 0.03 OrthoFinder output from all 47 species
Smo116559 No alias Pentatricopeptide repeat-containing protein At3g09040,... 0.02 OrthoFinder output from all 47 species
Solyc01g110010.3.1 Solyc01g110010 Pentatricopeptide repeat-containing protein At1g74600,... 0.03 OrthoFinder output from all 47 species
Solyc07g006990.3.1 Solyc07g006990 Putative pentatricopeptide repeat-containing protein... 0.02 OrthoFinder output from all 47 species
Solyc09g010070.1.1 EMB2758, Solyc09g010070 Pentatricopeptide repeat-containing protein At4g33990... 0.02 OrthoFinder output from all 47 species
Spa_g23504 EMB2758 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Spa_g33733 EMB2758 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g06419 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g09254 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g26628 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g38392 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g44069 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g44078 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e007600_P001 Zm00001e007600 Putative pentatricopeptide repeat-containing protein... 0.02 OrthoFinder output from all 47 species
Zm00001e015440_P001 CRR22, Zm00001e015440 Pentatricopeptide repeat-containing protein At3g57430,... 0.02 OrthoFinder output from all 47 species
Zm00001e018565_P001 Zm00001e018565 Pentatricopeptide repeat-containing protein At3g13880... 0.02 OrthoFinder output from all 47 species
Zm00001e021453_P001 CRR28, Zm00001e021453 Pentatricopeptide repeat-containing protein At5g06540... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 138 160
IPR002885 Pentatricopeptide_repeat 336 357
IPR002885 Pentatricopeptide_repeat 236 257
IPR002885 Pentatricopeptide_repeat 262 309
IPR002885 Pentatricopeptide_repeat 163 211
No external refs found!