Aspi01Gene45615.t1 (PGP11, Aspi01Gene45615)

Aliases : PGP11, Aspi01Gene45615

Description : subfamily ABCB transporter & original description: none

Gene families : OG0000048 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Aspi01Gene45615.t1
Cluster	HCCA: Cluster_122

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00010p00254310	ABCB19,...	Solute transport.primary active transport.ABC...	0.07	OrthoFinder output from all 47 species
AMTR_s00055p00102180	ABCB14,...	Solute transport.primary active transport.ABC...	0.03	OrthoFinder output from all 47 species
AT4G01830	PGP5	P-glycoprotein 5	0.03	OrthoFinder output from all 47 species
AT4G25960	PGP2	P-glycoprotein 2	0.04	OrthoFinder output from all 47 species
AT5G46540	PGP7	P-glycoprotein 7	0.03	OrthoFinder output from all 47 species
Adi_g010407	PGP2	subfamily ABCB transporter & original description: none	0.06	OrthoFinder output from all 47 species
Adi_g010452	ABCB19,...	subfamily ABCB transporter & original description: none	0.03	OrthoFinder output from all 47 species
Adi_g021749	ABCB19,...	subfamily ABCB transporter & original description: none	0.03	OrthoFinder output from all 47 species
Adi_g076577	ABCB19,...	subfamily ABCB transporter & original description: none	0.02	OrthoFinder output from all 47 species
Ala_g25151	PGP2	subfamily ABCB transporter & original description: none	0.05	OrthoFinder output from all 47 species
Als_g05763	ABCB19,...	subfamily ABCB transporter & original description: none	0.04	OrthoFinder output from all 47 species
Als_g07510	PGP11	subfamily ABCB transporter & original description: none	0.04	OrthoFinder output from all 47 species
Als_g09585	PGP10	subfamily ABCB transporter & original description: none	0.05	OrthoFinder output from all 47 species
Als_g12027	PGP2	subfamily ABCB transporter & original description: none	0.03	OrthoFinder output from all 47 species
Als_g14091	ATPGP4, PGP4, ABCB4, MDR4	subfamily ABCB transporter & original description: none	0.06	OrthoFinder output from all 47 species
Als_g14092	PGP21	subfamily ABCB transporter & original description: none	0.07	OrthoFinder output from all 47 species
Als_g33230	ABCB14, ATABCB14, PGP14	subfamily ABCB transporter & original description: none	0.03	OrthoFinder output from all 47 species
Aop_g22138	ABCB19,...	subfamily ABCB transporter & original description: none	0.06	OrthoFinder output from all 47 species
Aop_g22258	PGP2	subfamily ABCB transporter & original description: none	0.05	OrthoFinder output from all 47 species
Aop_g32929	ABCB19,...	subfamily ABCB transporter & original description: none	0.04	OrthoFinder output from all 47 species
Azfi_s0208.g057960	PGP2	not classified & original description: CDS=388-3987	0.04	OrthoFinder output from all 47 species
Cba_g01329	PGP2	subfamily ABCB transporter & original description: none	0.03	OrthoFinder output from all 47 species
Cba_g07645	PGP13	subfamily ABCB transporter & original description: none	0.06	OrthoFinder output from all 47 species
Ceric.06G076400.1	ABCB19,...	subfamily ABCB transporter & original description:...	0.05	OrthoFinder output from all 47 species
Ceric.1Z238200.1	Ceric.1Z238200	subfamily ABCB transporter & original description:...	0.04	OrthoFinder output from all 47 species
Ceric.34G053700.1	PGP2, Ceric.34G053700	subfamily ABCB transporter & original description:...	0.04	OrthoFinder output from all 47 species
Ceric.36G048300.1	Ceric.36G048300	subfamily ABCB transporter & original description:...	0.04	OrthoFinder output from all 47 species
Dac_g03829	ABCB19,...	subfamily ABCB transporter & original description: none	0.04	OrthoFinder output from all 47 species
Dac_g06939	PGP13	subfamily ABCB transporter & original description: none	0.03	OrthoFinder output from all 47 species
Dac_g10485	ABCB14, ATABCB14, PGP14	subfamily ABCB transporter & original description: none	0.04	OrthoFinder output from all 47 species
Dac_g14063	PGP11	subfamily ABCB transporter & original description: none	0.04	OrthoFinder output from all 47 species
Dcu_g12428	PGP2	subfamily ABCB transporter & original description: none	0.04	OrthoFinder output from all 47 species
Dcu_g40826	PGP2	subfamily ABCB transporter & original description: none	0.06	OrthoFinder output from all 47 species
Dcu_g41879	ABCB19,...	subfamily ABCB transporter & original description: none	0.05	OrthoFinder output from all 47 species
Dde_g30302	PGP2	subfamily ABCB transporter & original description: none	0.03	OrthoFinder output from all 47 species
Dde_g30303	PGP2	subfamily ABCB transporter & original description: none	0.03	OrthoFinder output from all 47 species
Dde_g46023	PGP13	subfamily ABCB transporter & original description: none	0.05	OrthoFinder output from all 47 species
GSVIVT01000580001	No alias	ABC transporter B family member 15 OS=Arabidopsis thaliana	0.03	OrthoFinder output from all 47 species
GSVIVT01013125001	PGP2	Solute transport.primary active transport.ABC...	0.03	OrthoFinder output from all 47 species
GSVIVT01021365001	PGP9	Solute transport.primary active transport.ABC...	0.04	OrthoFinder output from all 47 species
GSVIVT01033645001	PGP1, ABCB1, ATPGP1	Solute transport.primary active transport.ABC...	0.02	OrthoFinder output from all 47 species
Gb_07563	ABCB19,...	subfamily ABCB transporter	0.03	OrthoFinder output from all 47 species
Gb_08615	PGP11	ABC transporter B family member 4 OS=Arabidopsis...	0.02	OrthoFinder output from all 47 species
Gb_08616	ATPGP4, PGP4, ABCB4, MDR4	subfamily ABCB transporter	0.03	OrthoFinder output from all 47 species
Gb_13906	PGP2	subfamily ABCB transporter	0.04	OrthoFinder output from all 47 species
Gb_13908	PGP10	ABC transporter B family member 10 OS=Arabidopsis...	0.02	OrthoFinder output from all 47 species
Gb_32125	PGP11	subfamily ABCB transporter	0.03	OrthoFinder output from all 47 species
Gb_36862	PGP21	subfamily ABCB transporter	0.03	OrthoFinder output from all 47 species
LOC_Os02g46680.1	PGP2, LOC_Os02g46680	subfamily ABCB transporter	0.02	OrthoFinder output from all 47 species
LOC_Os04g38570.1	ABCB19,...	auxin efflux transporter (ABCB19)	0.03	OrthoFinder output from all 47 species
LOC_Os04g54930.1	ABCB19,...	subfamily ABCB transporter	0.02	OrthoFinder output from all 47 species
Len_g02924	PGP2	subfamily ABCB transporter & original description: none	0.03	OrthoFinder output from all 47 species
MA_10431815g0020	ABCB19,...	auxin efflux transporter (ABCB19). subfamily ABCB transporter	0.04	OrthoFinder output from all 47 species
MA_10432922g0010	No alias	subfamily ABCB transporter	0.03	OrthoFinder output from all 47 species
MA_126766g0010	PGP2	subfamily ABCB transporter	0.04	OrthoFinder output from all 47 species
MA_6958g0010	PGP21	ABC transporter B family member 21 OS=Arabidopsis...	0.01	OrthoFinder output from all 47 species
MA_934204g0010	No alias	subfamily ABCB transporter	0.04	OrthoFinder output from all 47 species
Mp2g02920.1	ABCB19,...	auxin efflux transporter (ABCB19). subfamily ABCB transporter	0.03	OrthoFinder output from all 47 species
Mp2g11920.1	ABCB19,...	subfamily ABCB transporter	0.03	OrthoFinder output from all 47 species
Mp2g21430.1	No alias	subfamily ABCB transporter	0.02	OrthoFinder output from all 47 species
Mp3g11830.1	ABCB19,...	auxin efflux transporter (ABCB19). subfamily ABCB transporter	0.02	OrthoFinder output from all 47 species
Mpzg01120.1	No alias	no hits & (original description: none)	0.03	OrthoFinder output from all 47 species
Msp_g31505	PGP11	subfamily ABCB transporter & original description: none	0.04	OrthoFinder output from all 47 species
Nbi_g02480	PGP11	subfamily ABCB transporter & original description: none	0.03	OrthoFinder output from all 47 species
Nbi_g02507	PGP6	subfamily ABCB transporter & original description: none	0.01	OrthoFinder output from all 47 species
Nbi_g03862	ABCB19,...	subfamily ABCB transporter & original description: none	0.06	OrthoFinder output from all 47 species
Nbi_g24809	PGP2	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Nbi_g27262	PGP13	subfamily ABCB transporter & original description: none	0.03	OrthoFinder output from all 47 species
Nbi_g32847	PGP21	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Ore_g29224	ABCB19,...	subfamily ABCB transporter & original description: none	0.03	OrthoFinder output from all 47 species
Ore_g38310	PGP13	subfamily ABCB transporter & original description: none	0.04	OrthoFinder output from all 47 species
Pir_g26459	ABCB19,...	subfamily ABCB transporter & original description: none	0.01	OrthoFinder output from all 47 species
Pir_g30508	PGP5	not classified & original description: none	0.01	OrthoFinder output from all 47 species
Pnu_g16181	PGP11	subfamily ABCB transporter & original description: none	0.03	OrthoFinder output from all 47 species
Pp3c21_18190V3.1	ABCB19,...	ATP binding cassette subfamily B19	0.01	OrthoFinder output from all 47 species
Ppi_g04001	ABCB19,...	subfamily ABCB transporter & original description: none	0.03	OrthoFinder output from all 47 species
Ppi_g07008	ABCB14, ATABCB14, PGP14	subfamily ABCB transporter & original description: none	0.03	OrthoFinder output from all 47 species
Ppi_g13619	No alias	subfamily ABCB transporter & original description: none	0.03	OrthoFinder output from all 47 species
Sacu_v1.1_s0001.g000035	PGP13	subfamily ABCB transporter & original description: CDS=555-4511	0.05	OrthoFinder output from all 47 species
Sacu_v1.1_s0030.g010416	ABCB19,...	subfamily ABCB transporter & original description: CDS=327-1289	0.04	OrthoFinder output from all 47 species
Sacu_v1.1_s0054.g014291	PGP2	subfamily ABCB transporter & original description: CDS=1-4248	0.04	OrthoFinder output from all 47 species
Sacu_v1.1_s0084.g018197	ABCB19,...	subfamily ABCB transporter & original description: CDS=226-4089	0.03	OrthoFinder output from all 47 species
Sacu_v1.1_s0095.g019197	No alias	subfamily ABCB transporter & original description: CDS=1-2220	0.05	OrthoFinder output from all 47 species
Sacu_v1.1_s0111.g020710	ABCB19,...	not classified & original description: CDS=1-1380	0.03	OrthoFinder output from all 47 species
Sacu_v1.1_s0146.g023107	PGP2	subfamily ABCB transporter & original description: CDS=729-4781	0.05	OrthoFinder output from all 47 species
Sam_g24632	No alias	subfamily ABCB transporter & original description: none	0.04	OrthoFinder output from all 47 species
Sam_g32980	No alias	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Smo148837	ABCB19,...	Solute transport.primary active transport.ABC...	0.03	OrthoFinder output from all 47 species
Smo230688	ABCB19,...	Solute transport.primary active transport.ABC...	0.04	OrthoFinder output from all 47 species
Solyc02g087870.3.1	ABCB19,...	auxin efflux transporter (ABCB19). subfamily ABCB transporter	0.04	OrthoFinder output from all 47 species
Solyc06g009280.1.1	PGP11, Solyc06g009280	subfamily ABCB transporter	0.04	OrthoFinder output from all 47 species
Solyc11g067300.2.1	PGP11, Solyc11g067300	subfamily ABCB transporter	0.04	OrthoFinder output from all 47 species
Spa_g06203	PGP13	subfamily ABCB transporter & original description: none	0.04	OrthoFinder output from all 47 species
Spa_g08601	PGP11	subfamily ABCB transporter & original description: none	0.03	OrthoFinder output from all 47 species
Spa_g09413	PGP2	subfamily ABCB transporter & original description: none	0.06	OrthoFinder output from all 47 species
Spa_g47519	PGP2	subfamily ABCB transporter & original description: none	0.04	OrthoFinder output from all 47 species
Spa_g56665	ABCB19,...	not classified & original description: none	0.05	OrthoFinder output from all 47 species
Tin_g06699	PGP2	subfamily ABCB transporter & original description: none	0.04	OrthoFinder output from all 47 species
Tin_g44999	ATPGP4, PGP4, ABCB4, MDR4	not classified & original description: none	0.01	OrthoFinder output from all 47 species
Zm00001e017444_P002	PGP21, Zm00001e017444	subfamily ABCB transporter	0.02	OrthoFinder output from all 47 species
Zm00001e020073_P001	ATPGP4, PGP4,...	subfamily ABCB transporter	0.02	OrthoFinder output from all 47 species
Zm00001e023274_P001	PGP2, Zm00001e023274	subfamily ABCB transporter	0.03	OrthoFinder output from all 47 species
Zm00001e025063_P001	Zm00001e025063	subfamily ABCB transporter	0.01	OrthoFinder output from all 47 species
Zm00001e041008_P003	ABCB19,...	auxin efflux transporter (ABCB19). subfamily ABCB transporter	0.04	OrthoFinder output from all 47 species
Zm00001e041087_P002	Zm00001e041087	subfamily ABCB transporter	0.02	OrthoFinder output from all 47 species
Zm00001e041760_P001	ABCB19,...	auxin efflux transporter (ABCB19). subfamily ABCB transporter	0.04	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005215	transporter activity	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005524	ATP binding	IEA	Interproscan
CC	GO:0005575	cellular_component	None	Extended
BP	GO:0006810	transport	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009987	cellular process	None	Extended
MF	GO:0015399	primary active transmembrane transporter activity	None	Extended
CC	GO:0016020	membrane	IEA	Interproscan
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0022804	active transmembrane transporter activity	None	Extended
MF	GO:0022857	transmembrane transporter activity	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0042626	ATPase-coupled transmembrane transporter activity	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
BP	GO:0051179	localization	None	Extended
BP	GO:0051234	establishment of localization	None	Extended
BP	GO:0055085	transmembrane transport	IEA	Interproscan
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
MF	GO:0140359	ABC-type transporter activity	IEA	Interproscan
MF	GO:0140657	ATP-dependent activity	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

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Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR011527	ABC1_TM_dom	32	301
IPR011527	ABC1_TM_dom	694	963
IPR003439	ABC_transporter-like_ATP-bd	372	519
IPR003439	ABC_transporter-like_ATP-bd	1031	1180

External Links

No external refs found!

Aspi01Gene45615.t1 (PGP11, Aspi01Gene45615)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation