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  5. Aspi01Gene47320.t1

Aspi01Gene47320.t1 (PAB2, PABP2, ATPAB2,...)


Aliases : PAB2, PABP2, ATPAB2, Aspi01Gene47320

Description : mRNA poly-A-tail binding factor *(PABP) & original description: none


Gene families : OG0000326 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000326_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Aspi01Gene47320.t1

Target Alias Description ECC score Gene Family Method Actions
Adi_g005352 PAB2, PABP2, ATPAB2 mRNA poly-A-tail binding factor *(PABP) & original... 0.03 OrthoFinder output from all 47 species
Adi_g023675 PAB2, PABP2, ATPAB2 mRNA poly-A-tail binding factor *(PABP) & original... 0.03 OrthoFinder output from all 47 species
Aop_g05955 PAB2, PABP2, ATPAB2 mRNA poly-A-tail binding factor *(PABP) & original... 0.03 OrthoFinder output from all 47 species
GSVIVT01009455001 PAB8, PABP8 Protein biosynthesis.translation initiation.mRNA... 0.03 OrthoFinder output from all 47 species
GSVIVT01009461001 PAB8, PABP8 Polyadenylate-binding protein 8 OS=Arabidopsis thaliana 0.04 OrthoFinder output from all 47 species
Lfl_g03288 PAB2, PABP2, ATPAB2 mRNA poly-A-tail binding factor *(PABP) & original... 0.03 OrthoFinder output from all 47 species
Lfl_g06662 PAB2, PABP2, ATPAB2 mRNA poly-A-tail binding factor *(PABP) & original... 0.03 OrthoFinder output from all 47 species
Lfl_g11365 PAB2, PABP2, ATPAB2 mRNA poly-A-tail binding factor *(PABP) & original... 0.03 OrthoFinder output from all 47 species
Pir_g02565 PAB8, PABP8 mRNA poly-A-tail binding factor *(PABP) & original... 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0157.g023696 PAB8, PABP8 mRNA poly-A-tail binding factor *(PABP) & original... 0.03 OrthoFinder output from all 47 species
Sam_g10629 No alias mRNA poly-A-tail binding factor *(PABP) & original... 0.02 OrthoFinder output from all 47 species
Tin_g29780 PAB8, PABP8 mRNA poly-A-tail binding factor *(PABP) & original... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR000504 RRM_dom 113 181
IPR000504 RRM_dom 204 272
IPR000504 RRM_dom 307 375
IPR000504 RRM_dom 25 94
No external refs found!