1. Home
  2. Species
  3. Alsophila spinulosa
  4. Sequence
  5. Aspi01Gene48962.t1

Aspi01Gene48962.t1 (TCP13, TFPD, PTF1,...)


Aliases : TCP13, TFPD, PTF1, Aspi01Gene48962

Description : TCP-type transcription factor & original description: none


Gene families : OG0000529 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000529_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Aspi01Gene48962.t1
Cluster HCCA: Cluster_18

Target Alias Description ECC score Gene Family Method Actions
AT1G53230 TCP3 TEOSINTE BRANCHED 1, cycloidea and PCF transcription factor 3 0.01 OrthoFinder output from all 47 species
AT3G02150 TCP13, TFPD, PTF1 plastid transcription factor 1 0.03 OrthoFinder output from all 47 species
AT5G08070 TCP17 TCP domain protein 17 0.03 OrthoFinder output from all 47 species
Aev_g07745 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aev_g15116 TCP2 TCP-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.01G003200.1 TCP3, Ceric.01G003200 TCP-type transcription factor & original description:... 0.03 OrthoFinder output from all 47 species
Ceric.27G008200.1 TCP17, Ceric.27G008200 TCP-type transcription factor & original description:... 0.03 OrthoFinder output from all 47 species
Dcu_g07031 TCP13, TFPD, PTF1 TCP-type transcription factor & original description: none 0.05 OrthoFinder output from all 47 species
GSVIVT01020666001 TCP4, MEE35 RNA biosynthesis.transcriptional activation.TCP... 0.02 OrthoFinder output from all 47 species
Gb_38376 TCP2 transcription factor (TCP) 0.04 OrthoFinder output from all 47 species
LOC_Os03g57190.1 ATTCP24, TCP24,... transcription factor (TCP) 0.03 OrthoFinder output from all 47 species
LOC_Os12g42190.1 ATTCP24, TCP24,... transcription factor (TCP) 0.03 OrthoFinder output from all 47 species
Len_g03300 TCP2 TCP-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
MA_101752g0020 ATTCP24, TCP24 transcription factor (TCP) 0.03 OrthoFinder output from all 47 species
MA_52440g0010 TCP4, MEE35 transcription factor (TCP) 0.02 OrthoFinder output from all 47 species
Mp1g19590.1 TCP3 transcription factor (TCP) 0.01 OrthoFinder output from all 47 species
Ore_g05160 TCP3 TCP-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Solyc02g089020.2.1 TCP13, TFPD,... transcription factor (TCP) 0.04 OrthoFinder output from all 47 species
Zm00001e019734_P001 TCP5, Zm00001e019734 transcription factor (TCP) 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR017887 TF_TCP_subgr 320 515
No external refs found!