Aspi01Gene48992.t1 (REME1, Aspi01Gene48992)


Aliases : REME1, Aspi01Gene48992

Description : not classified & original description: none


Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Aspi01Gene48992.t1

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00053p00090700 evm_27.TU.AmTr_v1... Pentatricopeptide repeat-containing protein At3g13880... 0.03 OrthoFinder output from all 47 species
AT5G44785 OSB3 organellar single-stranded DNA binding protein 3 0.03 OrthoFinder output from all 47 species
Adi_g110646 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g12718 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Als_g18971 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g30718 EMB2758 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g05266 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g16798 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g26985 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g27904 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aob_g28685 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g37339 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g37348 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g37590 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g09092 No alias ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g16410 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Azfi_s0015.g013967 No alias not classified & original description: CDS=1-2631 0.01 OrthoFinder output from all 47 species
Azfi_s0140.g051267 OTP84 not classified & original description: CDS=59-2905 0.03 OrthoFinder output from all 47 species
Cba_g05714 VAC1, ECB2, ATECB2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g06233 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Cba_g06573 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g07194 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Cba_g07786 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g11192 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g19725 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g38342 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g45827 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g68679 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.10G007000.1 Ceric.10G007000 not classified & original description: pacid=50613077... 0.03 OrthoFinder output from all 47 species
Ceric.25G047500.1 Ceric.25G047500 not classified & original description: pacid=50594463... 0.01 OrthoFinder output from all 47 species
Dac_g23468 CRR22 not classified & original description: none 0.01 OrthoFinder output from all 47 species
Dac_g43242 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g17245 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g32689 CRR22 not classified & original description: none 0.01 OrthoFinder output from all 47 species
Dcu_g47882 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Len_g04332 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g18988 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g20943 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g34161 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g40021 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g03944 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Msp_g04467 OTP84 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Msp_g20567 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g28692 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Msp_g31349 CRR22 not classified & original description: none 0.01 OrthoFinder output from all 47 species
Nbi_g08946 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g18050 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g40748 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g04265 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g15855 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g06218 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Ppi_g05342 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g22095 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g29583 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g35865 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g53207 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g08130 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g11617 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g21944 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g25325 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g32958 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g45851 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g49237 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Smo91775 No alias Pentatricopeptide repeat-containing protein At4g25270,... 0.01 OrthoFinder output from all 47 species
Spa_g48095 CRR22 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g50449 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Tin_g31184 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 319 343
IPR002885 Pentatricopeptide_repeat 224 250
IPR002885 Pentatricopeptide_repeat 160 190
IPR002885 Pentatricopeptide_repeat 420 442
IPR002885 Pentatricopeptide_repeat 130 156
IPR002885 Pentatricopeptide_repeat 255 285
IPR002885 Pentatricopeptide_repeat 345 391
IPR046848 E_motif 462 516
No external refs found!