Aspi01Gene49895.t1 (CRR22, Aspi01Gene49895)


Aliases : CRR22, Aspi01Gene49895

Description : not classified & original description: none


Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Aspi01Gene49895.t1
Cluster HCCA: Cluster_66

Target Alias Description ECC score Gene Family Method Actions
Adi_g005702 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g035357 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g083164 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g089353 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g15170 No alias ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g17642 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g29330 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g25481 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g18500 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g28024 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g22398 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g26992 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Aob_g28234 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g42240 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene05589.t1 CRK8, Aspi01Gene05589 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aspi01Gene28076.t1 Aspi01Gene28076 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Azfi_s0001.g000557 OTP86 not classified & original description: CDS=1-2739 0.04 OrthoFinder output from all 47 species
Azfi_s0006.g010197 OTP82 not classified & original description: CDS=163-897 0.03 OrthoFinder output from all 47 species
Azfi_s0012.g012913 No alias not classified & original description: CDS=1-2943 0.01 OrthoFinder output from all 47 species
Azfi_s0015.g013967 No alias not classified & original description: CDS=1-2631 0.02 OrthoFinder output from all 47 species
Azfi_s0024.g020340 No alias not classified & original description: CDS=1-2319 0.02 OrthoFinder output from all 47 species
Azfi_s0027.g023505 No alias not classified & original description: CDS=32-2620 0.01 OrthoFinder output from all 47 species
Azfi_s0035.g025669 No alias not classified & original description: CDS=1-1770 0.03 OrthoFinder output from all 47 species
Azfi_s0298.g063573 No alias not classified & original description: CDS=1-3078 0.02 OrthoFinder output from all 47 species
Cba_g19898 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g30018 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.04G048900.1 Ceric.04G048900 ssDNA-binding protein *(OSB) & original description:... 0.03 OrthoFinder output from all 47 species
Ceric.07G042200.1 Ceric.07G042200 not classified & original description: pacid=50626031... 0.01 OrthoFinder output from all 47 species
Ceric.1Z131300.1 CRR22, Ceric.1Z131300 not classified & original description: pacid=50639026... 0.02 OrthoFinder output from all 47 species
Dcu_g38857 No alias ssDNA-binding protein *(OSB) & original description: none 0.01 OrthoFinder output from all 47 species
Dcu_g47921 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g23491 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g25816 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01000719001 OSB1 Cell cycle.organelle machineries.DNA... 0.03 OrthoFinder output from all 47 species
LOC_Os03g38580.1 EMB2261, LOC_Os03g38580 Pentatricopeptide repeat-containing protein At3g24000,... 0.02 OrthoFinder output from all 47 species
Len_g16226 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g18445 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Len_g18845 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g33777 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Len_g44793 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Lfl_g10905 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g11907 No alias ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g14104 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g28692 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Ore_g04779 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g05953 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Pir_g12921 VAC1, ECB2, ATECB2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g03120 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g06218 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g13334 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Ppi_g31859 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g35865 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g43481 REME1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g48450 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g53207 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g54934 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g21956 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g26323 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g30157 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Solyc04g016540.2.1 Solyc04g016540 Pentatricopeptide repeat-containing protein At2g39620... 0.01 OrthoFinder output from all 47 species
Spa_g00965 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g21674 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e002552_P001 Zm00001e002552 RNA editing factor (SEL1/PDM1) 0.02 OrthoFinder output from all 47 species
Zm00001e003605_P001 DOT4, Zm00001e003605 Pentatricopeptide repeat-containing protein DOT4,... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 262 309
IPR002885 Pentatricopeptide_repeat 60 105
IPR002885 Pentatricopeptide_repeat 160 208
IPR002885 Pentatricopeptide_repeat 329 360
No external refs found!