Aliases : TCP2, Aspi01Gene50266
Description : TCP-type transcription factor & original description: none
Gene families : OG0000529 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000529_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Aspi01Gene50266.t1 | |
| Cluster | HCCA: Cluster_72 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00154p00072430 | TCP13, TFPD,... | RNA biosynthesis.transcriptional activation.TCP... | 0.04 | OrthoFinder output from all 47 species | |
| AT1G53230 | TCP3 | TEOSINTE BRANCHED 1, cycloidea and PCF transcription factor 3 | 0.02 | OrthoFinder output from all 47 species | |
| Ala_g18903 | TCP3 | TCP-type transcription factor & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Aop_g07553 | TCP3 | TCP-type transcription factor & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Aspi01Gene02917.t2 | TCP3, Aspi01Gene02917 | TCP-type transcription factor & original description: none | 0.06 | OrthoFinder output from all 47 species | |
| Aspi01Gene64947.t1 | TCP3, Aspi01Gene64947 | TCP-type transcription factor & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Ceric.01G003200.1 | TCP3, Ceric.01G003200 | TCP-type transcription factor & original description:... | 0.05 | OrthoFinder output from all 47 species | |
| GSVIVT01008109001 | TCP5 | RNA biosynthesis.transcriptional activation.TCP... | 0.05 | OrthoFinder output from all 47 species | |
| GSVIVT01008234001 | TCP12, BRC2 | RNA biosynthesis.transcriptional activation.TCP... | 0.04 | OrthoFinder output from all 47 species | |
| GSVIVT01011962001 | TCP12, BRC2 | RNA biosynthesis.transcriptional activation.TCP... | 0.04 | OrthoFinder output from all 47 species | |
| Gb_35810 | TCP2 | transcription factor (TCP) | 0.06 | OrthoFinder output from all 47 species | |
| Gb_38376 | TCP2 | transcription factor (TCP) | 0.04 | OrthoFinder output from all 47 species | |
| Gb_38377 | TCP2 | transcription factor (TCP) | 0.04 | OrthoFinder output from all 47 species | |
| LOC_Os03g57190.1 | ATTCP24, TCP24,... | transcription factor (TCP) | 0.04 | OrthoFinder output from all 47 species | |
| LOC_Os05g43760.1 | TCP5, LOC_Os05g43760 | transcription factor (TCP) | 0.03 | OrthoFinder output from all 47 species | |
| MA_101752g0010 | No alias | no hits & (original description: none) | 0.03 | OrthoFinder output from all 47 species | |
| MA_3891g0010 | TCP13, TFPD, PTF1 | transcription factor (TCP) | 0.02 | OrthoFinder output from all 47 species | |
| Msp_g48155 | TCP3 | TCP-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Pnu_g26630 | TCP2 | TCP-type transcription factor & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Pnu_g26727 | TCP13, TFPD, PTF1 | TCP-type transcription factor & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Smo89227 | TCP2 | RNA biosynthesis.transcriptional activation.TCP... | 0.04 | OrthoFinder output from all 47 species | |
| Solyc02g089020.2.1 | TCP13, TFPD,... | transcription factor (TCP) | 0.03 | OrthoFinder output from all 47 species | |
| Solyc02g089830.2.1 | TCP1, Solyc02g089830 | transcription factor (TCP) | 0.02 | OrthoFinder output from all 47 species | |
| Solyc03g115010.3.1 | TCP5, Solyc03g115010 | transcription factor (TCP) | 0.03 | OrthoFinder output from all 47 species | |
| Solyc04g006980.1.1 | TCP12, BRC2,... | transcription factor (TCP) | 0.03 | OrthoFinder output from all 47 species | |
| Spa_g55051 | No alias | not classified & original description: none | 0.06 | OrthoFinder output from all 47 species | |
| Zm00001e009811_P001 | BRC1, ATTCP18,... | transcription factor (TCP) | 0.02 | OrthoFinder output from all 47 species | |
| Zm00001e011911_P001 | ATTCP24, TCP24,... | transcription factor (TCP) | 0.03 | OrthoFinder output from all 47 species | |
| Zm00001e032821_P001 | TCP2, Zm00001e032821 | transcription factor (TCP) | 0.03 | OrthoFinder output from all 47 species | |
| Zm00001e034097_P001 | BRC1, ATTCP18,... | transcription factor (TCP) | 0.03 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No Predicted GO terms available for this sequence |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR017887 | TF_TCP_subgr | 44 | 105 |
| No external refs found! |
