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  5. Aspi01Gene57316.t1

Aspi01Gene57316.t1 (SPL2, Aspi01Gene57316)


Aliases : SPL2, Aspi01Gene57316

Description : SBP-type transcription factor & original description: none


Gene families : OG0000121 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000121_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Aspi01Gene57316.t1
Cluster HCCA: Cluster_19

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00047p00197010 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.SBP... 0.05 OrthoFinder output from all 47 species
AMTR_s00106p00142470 SPL11,... RNA biosynthesis.transcriptional activation.SBP... 0.03 OrthoFinder output from all 47 species
AT5G18830 SPL7, ATSPL7 squamosa promoter binding protein-like 7 0.03 OrthoFinder output from all 47 species
Aev_g38966 SPL2 SBP-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene24833.t1 SPL2, Aspi01Gene24833 SBP-type transcription factor & original description: none 0.05 OrthoFinder output from all 47 species
Dcu_g48516 SPL2 SBP-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g22348 AtSPL9, SPL9 SBP-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g08586 SPL8 SBP-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01008556001 SPL13, SPL13A RNA biosynthesis.transcriptional activation.SBP... 0.02 OrthoFinder output from all 47 species
GSVIVT01018204001 No alias RNA biosynthesis.transcriptional activation.SBP... 0.02 OrthoFinder output from all 47 species
LOC_Os02g04680.1 SPL2, LOC_Os02g04680 transcription factor (SBP) 0.03 OrthoFinder output from all 47 species
LOC_Os09g32944.1 SPL13, SPL13A,... transcription factor (SBP) 0.02 OrthoFinder output from all 47 species
Ppi_g11404 SPL2 SBP-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g18143 SPL3 SBP-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0183.g024918 SPL5 SBP-type transcription factor & original description: CDS=1-1335 0.03 OrthoFinder output from all 47 species
Sam_g24360 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Solyc10g018780.3.1 SPL8, Solyc10g018780 transcription factor (SBP) 0.03 OrthoFinder output from all 47 species
Spa_g15676 SPL2 SBP-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g38145 SPL10 SBP-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e013761_P001 SPL2, Zm00001e013761 transcription factor (SBP) 0.03 OrthoFinder output from all 47 species
Zm00001e025234_P001 SPL2, Zm00001e025234 transcription factor (SBP) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR004333 SBP_dom 274 321
No external refs found!