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  5. Aspi01Gene58001.t1

Aspi01Gene58001.t1 (EXPA8, ATHEXP ALPHA...)


Aliases : EXPA8, ATHEXP ALPHA 1.11, EXP8, ATEXPA8, ATEXP8, Aspi01Gene58001

Description : not classified & original description: none


Gene families : OG0000032 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Aspi01Gene58001.t1
Cluster HCCA: Cluster_131

Target Alias Description ECC score Gene Family Method Actions
AT5G39300 ATEXPA25,... expansin A25 0.03 OrthoFinder output from all 47 species
Adi_g049444 ATEXPA10,... alpha-class expansin & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g27552 ATEXPA10,... alpha-class expansin & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene00387.t1 ATEXPA10,... alpha-class expansin & original description: none 0.05 OrthoFinder output from all 47 species
Aspi01Gene00428.t1 EXP15, ATEXPA15,... alpha-class expansin & original description: none 0.05 OrthoFinder output from all 47 species
Aspi01Gene00429.t1 EXP15, ATEXPA15,... alpha-class expansin & original description: none 0.05 OrthoFinder output from all 47 species
Aspi01Gene03666.t1 EXP15, ATEXPA15,... alpha-class expansin & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene03667.t1 EXP15, ATEXPA15,... alpha-class expansin & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene08256.t1 EXP15, ATEXPA15,... alpha-class expansin & original description: none 0.05 OrthoFinder output from all 47 species
Aspi01Gene14343.t1 ATEXPA4, ATEXP4,... alpha-class expansin & original description: none 0.08 OrthoFinder output from all 47 species
Aspi01Gene29952.t1 EXPA16, ATHEXP... alpha-class expansin & original description: none 0.05 OrthoFinder output from all 47 species
Aspi01Gene45675.t1 ATEXPA10,... alpha-class expansin & original description: none 0.11 OrthoFinder output from all 47 species
Aspi01Gene58043.t1 ATEXPA10,... alpha-class expansin & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene66971.t1 ATEXPA10,... alpha-class expansin & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene66973.t1 ATEXPA10,... alpha-class expansin & original description: none 0.06 OrthoFinder output from all 47 species
Aspi01Gene66977.t1 ATEXPA10,... alpha-class expansin & original description: none 0.09 OrthoFinder output from all 47 species
Azfi_s0959.g093909 No alias not classified & original description: CDS=1-708 0.03 OrthoFinder output from all 47 species
Ehy_g26486 ATEXPA4, ATEXP4,... alpha-class expansin & original description: none 0.05 OrthoFinder output from all 47 species
LOC_Os05g39990.1 LOC_Os05g39990 alpha-class expansin 0.02 OrthoFinder output from all 47 species
Ore_g44001 ATEXPA1, EXP1,... alpha-class expansin & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g15939 No alias alpha-class expansin & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g30401 EXPA16, ATHEXP... alpha-class expansin & original description: none 0.01 OrthoFinder output from all 47 species
Zm00001e015336_P002 ATHEXP BETA 1.1,... Expansin-B11 OS=Oryza sativa subsp. japonica... 0.02 OrthoFinder output from all 47 species
Zm00001e038931_P002 ATEXPL2, EXPL2,... alpha-like-class expansin 0.02 OrthoFinder output from all 47 species
Zm00001e041520_P001 ATHEXP BETA 1.4,... Expansin-B18 OS=Oryza sativa subsp. japonica... 0.01 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR007117 Expansin_CBD 13 90
No external refs found!