Aspi01Gene59063.t1 (Aspi01Gene59063)


Aliases : Aspi01Gene59063

Description : LRR-domain extensin & original description: none


Gene families : OG0000448 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000448_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Aspi01Gene59063.t1

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00160p00027170 evm_27.TU.AmTr_v1... Cell wall.cell wall proteins.hydroxyproline-rich... 0.02 OrthoFinder output from all 47 species
AT3G22800 No alias Leucine-rich repeat (LRR) family protein 0.04 OrthoFinder output from all 47 species
AT4G06744 No alias Leucine-rich repeat (LRR) family protein 0.03 OrthoFinder output from all 47 species
AT4G28380 No alias Leucine-rich repeat (LRR) family protein 0.08 OrthoFinder output from all 47 species
AT4G33970 No alias Leucine-rich repeat (LRR) family protein 0.04 OrthoFinder output from all 47 species
Aob_g10583 No alias LRR-domain extensin & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g13705 No alias LRR-domain extensin & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g11490 No alias LRR-domain extensin & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene69387.t1 LRX2, Aspi01Gene69387 LRR-domain extensin & original description: none 0.06 OrthoFinder output from all 47 species
Azfi_s0008.g011627 LRX2 LRR-domain extensin & original description: CDS=1-1815 0.04 OrthoFinder output from all 47 species
Azfi_s0114.g046029 No alias LRR-domain extensin & original description: CDS=1-1872 0.03 OrthoFinder output from all 47 species
Cba_g14018 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g55943 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g10806 LRX2 LRR-domain extensin & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g07517 No alias LRR-domain extensin & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g25878 No alias LRR-domain extensin & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g04566 LRX2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01020574001 No alias Cell wall.cell wall proteins.hydroxyproline-rich... 0.04 OrthoFinder output from all 47 species
GSVIVT01031702001 No alias Uncharacterized protein At4g06744 OS=Arabidopsis thaliana 0.04 OrthoFinder output from all 47 species
LOC_Os02g04540.1 LRX1, LOC_Os02g04540 LRR-domain extensin 0.02 OrthoFinder output from all 47 species
LOC_Os03g43650.1 LOC_Os03g43650 LRR-domain extensin 0.04 OrthoFinder output from all 47 species
LOC_Os04g42620.1 LOC_Os04g42620 Uncharacterized protein At4g06744 OS=Arabidopsis... 0.04 OrthoFinder output from all 47 species
LOC_Os05g08770.2 LOC_Os05g08770 LRR-domain extensin 0.03 OrthoFinder output from all 47 species
Len_g28005 No alias LRR-domain extensin & original description: none 0.03 OrthoFinder output from all 47 species
MA_100985g0010 LRX2 LRR-domain extensin 0.03 OrthoFinder output from all 47 species
Mp2g25390.1 No alias Leucine-rich repeat extensin-like protein 4... 0.03 OrthoFinder output from all 47 species
Msp_g29675 No alias LRR-domain extensin & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g40535 No alias LRR-domain extensin & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g17890 LRX2 LRR-domain extensin & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g13602 LRX2 LRR-domain extensin & original description: none 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0039.g012064 No alias LRR-domain extensin & original description: CDS=1-1452 0.03 OrthoFinder output from all 47 species
Smo81544 LRX2 Cell wall.cell wall proteins.hydroxyproline-rich... 0.03 OrthoFinder output from all 47 species
Solyc07g053840.1.1 Solyc07g053840 LRR-domain extensin 0.06 OrthoFinder output from all 47 species
Solyc09g082530.3.1 Solyc09g082530 LRR-domain extensin 0.05 OrthoFinder output from all 47 species
Solyc10g050110.1.1 Solyc10g050110 Uncharacterized protein At4g06744 OS=Arabidopsis... 0.04 OrthoFinder output from all 47 species
Solyc12g006980.2.1 Solyc12g006980 LRR-domain extensin 0.02 OrthoFinder output from all 47 species
Spa_g49283 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e026840_P001 Zm00001e026840 LRR-domain extensin 0.03 OrthoFinder output from all 47 species
Zm00001e041184_P001 Zm00001e041184 Uncharacterized protein At4g06744 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR013210 LRR_N_plant-typ 78 114
IPR001611 Leu-rich_rpt 270 328
No external refs found!