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  5. Aspi01Gene59342.t1

Aspi01Gene59342.t1 (Aspi01Gene59342)


Aliases : Aspi01Gene59342

Description : pectin methylesterase & original description: none


Gene families : OG0000083 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000083_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Aspi01Gene59342.t1
Cluster HCCA: Cluster_72

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00003p00085870 evm_27.TU.AmTr_v1... Cell wall.pectin.homogalacturonan.modification and... 0.03 OrthoFinder output from all 47 species
AMTR_s00007p00264370 evm_27.TU.AmTr_v1... Cell wall.pectin.homogalacturonan.modification and... 0.02 OrthoFinder output from all 47 species
AMTR_s00027p00247950 evm_27.TU.AmTr_v1... Cell wall.pectin.homogalacturonan.modification and... 0.03 OrthoFinder output from all 47 species
AMTR_s00056p00166920 evm_27.TU.AmTr_v1... Cell wall.pectin.homogalacturonan.modification and... 0.03 OrthoFinder output from all 47 species
AMTR_s00116p00025230 evm_27.TU.AmTr_v1... Probable pectinesterase 8 OS=Arabidopsis thaliana 0.05 OrthoFinder output from all 47 species
AT1G05310 No alias Pectin lyase-like superfamily protein 0.04 OrthoFinder output from all 47 species
AT2G36710 No alias Pectin lyase-like superfamily protein 0.04 OrthoFinder output from all 47 species
AT5G19730 No alias Pectin lyase-like superfamily protein 0.03 OrthoFinder output from all 47 species
AT5G26810 No alias Pectin lyase-like superfamily protein 0.04 OrthoFinder output from all 47 species
Aev_g17009 No alias pectin methylesterase & original description: none 0.04 OrthoFinder output from all 47 species
Aev_g19093 No alias pectin methylesterase & original description: none 0.04 OrthoFinder output from all 47 species
Aev_g38864 No alias pectin methylesterase & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g39532 No alias pectin methylesterase & original description: none 0.05 OrthoFinder output from all 47 species
Aev_g40489 No alias pectin methylesterase & original description: none 0.05 OrthoFinder output from all 47 species
Ala_g16581 No alias pectin methylesterase & original description: none 0.03 OrthoFinder output from all 47 species
Als_g47599 No alias pectin methylesterase & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g02833 No alias pectin methylesterase & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g02507 No alias pectin methylesterase & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g07992 No alias pectin methylesterase & original description: none 0.07 OrthoFinder output from all 47 species
Aop_g16751 No alias pectin methylesterase & original description: none 0.07 OrthoFinder output from all 47 species
Aop_g20021 No alias pectin methylesterase & original description: none 0.06 OrthoFinder output from all 47 species
Aop_g20106 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g21373 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Aop_g22415 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Aop_g25292 No alias pectin methylesterase & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g30459 No alias pectin methylesterase & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g56742 No alias pectin methylesterase & original description: none 0.07 OrthoFinder output from all 47 species
Aop_g58922 No alias pectin methylesterase & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene07316.t2 VGDH1, Aspi01Gene07316 pectin methylesterase & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene59345.t1 Aspi01Gene59345 pectin methylesterase & original description: none 0.05 OrthoFinder output from all 47 species
Aspi01Gene59347.t1 Aspi01Gene59347 pectin methylesterase & original description: none 0.06 OrthoFinder output from all 47 species
Aspi01Gene59353.t1 Aspi01Gene59353 pectin methylesterase & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene70538.t1 Aspi01Gene70538 pectin methylesterase & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene71978.t1 Aspi01Gene71978 pectin methylesterase & original description: none 0.04 OrthoFinder output from all 47 species
Azfi_s0003.g008131 No alias pectin methylesterase & original description: CDS=1-870 0.04 OrthoFinder output from all 47 species
Azfi_s0040.g026602 No alias pectin methylesterase & original description: CDS=187-1626 0.04 OrthoFinder output from all 47 species
Ceric.03G008900.1 Ceric.03G008900 pectin methylesterase & original description:... 0.04 OrthoFinder output from all 47 species
Ceric.05G031400.1 Ceric.05G031400 pectin methylesterase & original description:... 0.03 OrthoFinder output from all 47 species
Ceric.10G069000.1 Ceric.10G069000 pectin methylesterase & original description:... 0.03 OrthoFinder output from all 47 species
Ceric.10G071300.1 Ceric.10G071300 pectin methylesterase & original description:... 0.03 OrthoFinder output from all 47 species
Ceric.11G007800.1 Ceric.11G007800 not classified & original description: pacid=50595757... 0.04 OrthoFinder output from all 47 species
Ceric.13G037300.1 Ceric.13G037300 pectin methylesterase & original description:... 0.04 OrthoFinder output from all 47 species
Ceric.13G037400.1 Ceric.13G037400 pectin methylesterase & original description:... 0.04 OrthoFinder output from all 47 species
Ceric.13G038200.1 Ceric.13G038200 pectin methylesterase & original description:... 0.06 OrthoFinder output from all 47 species
Ceric.14G062500.1 Ceric.14G062500 pectin methylesterase & original description:... 0.04 OrthoFinder output from all 47 species
Ceric.1Z239300.1 Ceric.1Z239300 pectin methylesterase & original description:... 0.05 OrthoFinder output from all 47 species
Ceric.37G019300.1 Ceric.37G019300 pectin methylesterase & original description:... 0.03 OrthoFinder output from all 47 species
Ceric.39G035900.1 Ceric.39G035900 pectin methylesterase & original description:... 0.05 OrthoFinder output from all 47 species
Dac_g05020 No alias pectin methylesterase & original description: none 0.05 OrthoFinder output from all 47 species
Dac_g07534 No alias pectin methylesterase & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g06266 No alias pectin methylesterase & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g16361 No alias pectin methylesterase & original description: none 0.05 OrthoFinder output from all 47 species
Dcu_g28954 No alias pectin methylesterase & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g42904 No alias pectin methylesterase & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g13696 No alias pectin methylesterase & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g20873 No alias pectin methylesterase & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g38152 No alias pectin methylesterase & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g46321 No alias pectin methylesterase & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g08073 QRT1 pectin methylesterase & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g09802 No alias pectin methylesterase & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g12393 No alias pectin methylesterase & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g15499 No alias pectin methylesterase & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g31652 No alias pectin methylesterase & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01013832001 No alias Cell wall.pectin.homogalacturonan.modification and... 0.03 OrthoFinder output from all 47 species
GSVIVT01015290001 No alias Cell wall.pectin.homogalacturonan.modification and... 0.05 OrthoFinder output from all 47 species
GSVIVT01023786001 ATPE11, PE11 Cell wall.pectin.homogalacturonan.modification and... 0.03 OrthoFinder output from all 47 species
GSVIVT01031250001 No alias Cell wall.pectin.homogalacturonan.modification and... 0.02 OrthoFinder output from all 47 species
Gb_01460 No alias pectin methylesterase 0.03 OrthoFinder output from all 47 species
Gb_17798 No alias pectin methylesterase 0.04 OrthoFinder output from all 47 species
Gb_23209 No alias pectin methylesterase 0.03 OrthoFinder output from all 47 species
Gb_27225 No alias pectin methylesterase 0.04 OrthoFinder output from all 47 species
Gb_32012 QRT1 pectin methylesterase 0.05 OrthoFinder output from all 47 species
LOC_Os01g53990.1 LOC_Os01g53990 pectin methylesterase 0.04 OrthoFinder output from all 47 species
LOC_Os05g44600.1 LOC_Os05g44600 pectin methylesterase 0.03 OrthoFinder output from all 47 species
LOC_Os09g39760.1 LOC_Os09g39760 pectin methylesterase 0.02 OrthoFinder output from all 47 species
Len_g29036 No alias pectin methylesterase & original description: none 0.04 OrthoFinder output from all 47 species
Len_g53837 No alias pectin methylesterase & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g19805 No alias pectin methylesterase & original description: none 0.06 OrthoFinder output from all 47 species
MA_10428207g0020 No alias Probable pectinesterase 53 OS=Arabidopsis thaliana... 0.05 OrthoFinder output from all 47 species
MA_10428610g0010 No alias pectin methylesterase 0.03 OrthoFinder output from all 47 species
MA_16389g0020 No alias pectin methylesterase 0.02 OrthoFinder output from all 47 species
MA_19196g0010 ATPE11, PE11 pectin methylesterase 0.03 OrthoFinder output from all 47 species
MA_304854g0010 ATPE11, PE11 pectin methylesterase 0.03 OrthoFinder output from all 47 species
MA_66089g0010 No alias pectin methylesterase 0.04 OrthoFinder output from all 47 species
MA_87592g0010 ATPE11, PE11 pectin methylesterase 0.05 OrthoFinder output from all 47 species
Mp5g03920.1 No alias pectin methylesterase 0.03 OrthoFinder output from all 47 species
Mp5g03930.1 No alias pectin methylesterase 0.03 OrthoFinder output from all 47 species
Msp_g10586 No alias pectin methylesterase & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g38949 No alias pectin methylesterase & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g42451 No alias pectin methylesterase & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g44845 No alias pectin methylesterase & original description: none 0.05 OrthoFinder output from all 47 species
Ore_g25737 No alias pectin methylesterase & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g40521 No alias pectin methylesterase & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g40522 No alias pectin methylesterase & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g43955 No alias pectin methylesterase & original description: none 0.05 OrthoFinder output from all 47 species
Ore_g44819 No alias pectin methylesterase & original description: none 0.05 OrthoFinder output from all 47 species
Pir_g02205 No alias pectin methylesterase & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g20339 No alias pectin methylesterase & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g21379 No alias pectin methylesterase & original description: none 0.04 OrthoFinder output from all 47 species
Pp3c12_24000V3.1 Pp3c12_24000 Pectin lyase-like superfamily protein 0.02 OrthoFinder output from all 47 species
Ppi_g11138 No alias pectin methylesterase & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g14779 No alias pectin methylesterase & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g25901 No alias pectin methylesterase & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g29894 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g31507 No alias pectin methylesterase & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g61465 No alias pectin methylesterase & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g63851 No alias pectin methylesterase & original description: none 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0029.g010091 No alias pectin methylesterase & original description: CDS=1-882 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0104.g020122 No alias not classified & original description: CDS=269-877 0.03 OrthoFinder output from all 47 species
Sam_g44288 No alias pectin methylesterase & original description: none 0.03 OrthoFinder output from all 47 species
Smo81583 No alias Cell wall.pectin.homogalacturonan.modification and... 0.03 OrthoFinder output from all 47 species
Solyc04g080530.3.1 ATPE11, PE11,... pectin methylesterase 0.05 OrthoFinder output from all 47 species
Spa_g41355 No alias pectin methylesterase & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g47305 No alias pectin methylesterase & original description: none 0.06 OrthoFinder output from all 47 species
Spa_g50750 No alias pectin methylesterase & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g54582 No alias pectin methylesterase & original description: none 0.05 OrthoFinder output from all 47 species
Tin_g01655 No alias pecTin methylesterase & original description: none 0.07 OrthoFinder output from all 47 species
Tin_g07049 No alias pecTin methylesterase & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g15602 No alias pecTin methylesterase & original description: none 0.08 OrthoFinder output from all 47 species
Tin_g19866 No alias pecTin methylesterase & original description: none 0.06 OrthoFinder output from all 47 species
Tin_g36990 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Tin_g36991 No alias not classified & original description: none 0.08 OrthoFinder output from all 47 species
Tin_g43829 No alias pecTin methylesterase & original description: none 0.05 OrthoFinder output from all 47 species
Zm00001e033546_P001 Zm00001e033546 pectin methylesterase 0.03 OrthoFinder output from all 47 species
Zm00001e035522_P001 QRT1, Zm00001e035522 pectin methylesterase 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0030599 pectinesterase activity IEA Interproscan
BP GO:0042545 cell wall modification IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR000070 Pectinesterase_cat 92 377
No external refs found!