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  5. Aspi01Gene59354.t1

Aspi01Gene59354.t1 (Aspi01Gene59354)


Aliases : Aspi01Gene59354

Description : pectin methylesterase & original description: none


Gene families : OG0000083 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000083_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Aspi01Gene59354.t1
Cluster HCCA: Cluster_72

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00116p00025230 evm_27.TU.AmTr_v1... Probable pectinesterase 8 OS=Arabidopsis thaliana 0.08 OrthoFinder output from all 47 species
Aev_g18531 No alias pectin methylesterase & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g39532 No alias pectin methylesterase & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g40489 No alias pectin methylesterase & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g02833 No alias pectin methylesterase & original description: none 0.07 OrthoFinder output from all 47 species
Aob_g06410 No alias pectin methylesterase & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g07992 No alias pectin methylesterase & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g16751 No alias pectin methylesterase & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g20021 No alias pectin methylesterase & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g20602 No alias pectin methylesterase & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g21373 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g22415 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g56742 No alias pectin methylesterase & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene05718.t1 Aspi01Gene05718 pectin methylesterase & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene10492.t1 Aspi01Gene10492 pectin methylesterase & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene59341.t1 Aspi01Gene59341 pectin methylesterase & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene59347.t1 Aspi01Gene59347 pectin methylesterase & original description: none 0.04 OrthoFinder output from all 47 species
Ceric.03G008900.1 Ceric.03G008900 pectin methylesterase & original description:... 0.02 OrthoFinder output from all 47 species
Ceric.10G071300.1 Ceric.10G071300 pectin methylesterase & original description:... 0.04 OrthoFinder output from all 47 species
Ceric.10G071400.1 Ceric.10G071400 pectin methylesterase & original description:... 0.02 OrthoFinder output from all 47 species
Ceric.11G008400.1 Ceric.11G008400 pectin methylesterase & original description:... 0.05 OrthoFinder output from all 47 species
Ceric.13G038200.1 Ceric.13G038200 pectin methylesterase & original description:... 0.04 OrthoFinder output from all 47 species
Ceric.39G035900.1 Ceric.39G035900 pectin methylesterase & original description:... 0.02 OrthoFinder output from all 47 species
Dac_g05020 No alias pectin methylesterase & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g32626 No alias pectin methylesterase & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g06266 No alias pectin methylesterase & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g51244 No alias pectin methylesterase & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g13696 No alias pectin methylesterase & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g46321 No alias pectin methylesterase & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g08073 QRT1 pectin methylesterase & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g09802 No alias pectin methylesterase & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g12393 No alias pectin methylesterase & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01001327001 No alias Cell wall.pectin.homogalacturonan.modification and... 0.03 OrthoFinder output from all 47 species
GSVIVT01013838001 No alias Cell wall.pectin.homogalacturonan.modification and... 0.03 OrthoFinder output from all 47 species
GSVIVT01015290001 No alias Cell wall.pectin.homogalacturonan.modification and... 0.03 OrthoFinder output from all 47 species
LOC_Os04g46740.1 LOC_Os04g46740 pectin methylesterase 0.03 OrthoFinder output from all 47 species
Len_g53837 No alias pectin methylesterase & original description: none 0.05 OrthoFinder output from all 47 species
Lfl_g19805 No alias pectin methylesterase & original description: none 0.03 OrthoFinder output from all 47 species
MA_10428207g0020 No alias Probable pectinesterase 53 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
MA_10428610g0010 No alias pectin methylesterase 0.04 OrthoFinder output from all 47 species
MA_66089g0010 No alias pectin methylesterase 0.02 OrthoFinder output from all 47 species
MA_87592g0010 ATPE11, PE11 pectin methylesterase 0.02 OrthoFinder output from all 47 species
Mp2g01420.1 No alias pectin methylesterase 0.03 OrthoFinder output from all 47 species
Mp5g03920.1 No alias pectin methylesterase 0.02 OrthoFinder output from all 47 species
Mp5g03930.1 No alias pectin methylesterase 0.02 OrthoFinder output from all 47 species
Msp_g10586 No alias pectin methylesterase & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g07458 No alias pectin methylesterase & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g40521 No alias pectin methylesterase & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g40522 No alias pectin methylesterase & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g43683 No alias pectin methylesterase & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g43955 No alias pectin methylesterase & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g44819 No alias pectin methylesterase & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g02205 No alias pectin methylesterase & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g21379 No alias pectin methylesterase & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g11138 No alias pectin methylesterase & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g14779 No alias pectin methylesterase & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g25901 No alias pectin methylesterase & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g29894 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g63851 No alias pectin methylesterase & original description: none 0.02 OrthoFinder output from all 47 species
Solyc04g080530.3.1 ATPE11, PE11,... pectin methylesterase 0.04 OrthoFinder output from all 47 species
Spa_g03685 No alias pectin methylesterase & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g29524 No alias pectin methylesterase & original description: none 0.05 OrthoFinder output from all 47 species
Spa_g38344 No alias pectin methylesterase & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g41355 No alias pectin methylesterase & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g47305 No alias pectin methylesterase & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g01655 No alias pecTin methylesterase & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g07049 No alias pecTin methylesterase & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g09242 No alias pecTin methylesterase & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g15602 No alias pecTin methylesterase & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g19866 No alias pecTin methylesterase & original description: none 0.05 OrthoFinder output from all 47 species
Tin_g36990 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g36991 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Zm00001e002891_P001 Zm00001e002891 pectin methylesterase 0.03 OrthoFinder output from all 47 species
Zm00001e033546_P001 Zm00001e033546 pectin methylesterase 0.03 OrthoFinder output from all 47 species
Zm00001e035522_P001 QRT1, Zm00001e035522 pectin methylesterase 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0030599 pectinesterase activity IEA Interproscan
BP GO:0042545 cell wall modification IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR000070 Pectinesterase_cat 94 378
No external refs found!