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  5. Aspi01Gene59355.t1

Aspi01Gene59355.t1 (Aspi01Gene59355)


Aliases : Aspi01Gene59355

Description : pectin methylesterase & original description: none


Gene families : OG0000083 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000083_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Aspi01Gene59355.t1
Cluster HCCA: Cluster_238

Target Alias Description ECC score Gene Family Method Actions
Aev_g10289 No alias pectin methylesterase & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g10719 No alias pectin methylesterase & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g10720 No alias pectin methylesterase & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g17897 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g18114 No alias pectin methylesterase & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g18531 No alias pectin methylesterase & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g16581 No alias pectin methylesterase & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g16993 No alias pectin methylesterase & original description: none 0.01 OrthoFinder output from all 47 species
Aob_g11400 No alias pectin methylesterase & original description: none 0.04 OrthoFinder output from all 47 species
Aob_g14509 No alias pectin methylesterase & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g01243 No alias pectin methylesterase & original description: none 0.01 OrthoFinder output from all 47 species
Aspi01Gene11134.t1 Aspi01Gene11134 pectin methylesterase & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene31942.t1 Aspi01Gene31942 pectin methylesterase & original description: none 0.2 OrthoFinder output from all 47 species
Ceric.05G030500.1 Ceric.05G030500 pectin methylesterase & original description:... 0.07 OrthoFinder output from all 47 species
Ceric.29G054600.1 Ceric.29G054600 pectin methylesterase & original description:... 0.02 OrthoFinder output from all 47 species
Dac_g05020 No alias pectin methylesterase & original description: none 0.02 OrthoFinder output from all 47 species
Dac_g16825 No alias pectin methylesterase & original description: none 0.02 OrthoFinder output from all 47 species
Dac_g23541 No alias pectin methylesterase & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g25225 No alias pectin methylesterase & original description: none 0.01 OrthoFinder output from all 47 species
Dde_g27753 No alias pectin methylesterase & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g46321 No alias pectin methylesterase & original description: none 0.01 OrthoFinder output from all 47 species
GSVIVT01000525001 No alias Cell wall.pectin.homogalacturonan.modification and... 0.03 OrthoFinder output from all 47 species
GSVIVT01009729001 ATPE11, PE11 Cell wall.pectin.homogalacturonan.modification and... 0.1 OrthoFinder output from all 47 species
GSVIVT01015290001 No alias Cell wall.pectin.homogalacturonan.modification and... 0.01 OrthoFinder output from all 47 species
GSVIVT01031250001 No alias Cell wall.pectin.homogalacturonan.modification and... 0.02 OrthoFinder output from all 47 species
Gb_01459 No alias pectin methylesterase 0.01 OrthoFinder output from all 47 species
Gb_01460 No alias pectin methylesterase 0.01 OrthoFinder output from all 47 species
Gb_39595 No alias pectin methylesterase 0.06 OrthoFinder output from all 47 species
LOC_Os07g46190.1 LOC_Os07g46190 pectin methylesterase 0.04 OrthoFinder output from all 47 species
Len_g04732 No alias pectin methylesterase & original description: none 0.03 OrthoFinder output from all 47 species
MA_112715g0010 No alias pectin methylesterase 0.01 OrthoFinder output from all 47 species
MA_181657g0020 No alias pectin methylesterase 0.01 OrthoFinder output from all 47 species
MA_304854g0010 ATPE11, PE11 pectin methylesterase 0.01 OrthoFinder output from all 47 species
Msp_g39582 No alias pectin methylesterase & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g20425 No alias pectin methylesterase & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g39490 No alias pectin methylesterase & original description: none 0.01 OrthoFinder output from all 47 species
Pir_g01612 No alias pectin methylesterase & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g35988 No alias pectin methylesterase & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g20523 No alias pectin methylesterase & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0066.g016132 No alias pectin methylesterase & original description: CDS=1-684 0.01 OrthoFinder output from all 47 species
Sacu_v1.1_s0207.g025813 No alias pectin methylesterase & original description: CDS=1-1236 0.01 OrthoFinder output from all 47 species
Sam_g16125 No alias EC_3.1 hydrolase acting on ester bond & original... 0.02 OrthoFinder output from all 47 species
Sam_g38210 No alias EC_3.1 hydrolase acting on ester bond & original... 0.02 OrthoFinder output from all 47 species
Smo76951 No alias Cell wall.pectin.homogalacturonan.modification and... 0.04 OrthoFinder output from all 47 species
Solyc05g053680.1.1 Solyc05g053680 pectin methylesterase 0.01 OrthoFinder output from all 47 species
Spa_g41355 No alias pectin methylesterase & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g09242 No alias pecTin methylesterase & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g35486 No alias pecTin methylesterase & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g41171 No alias pecTin methylesterase & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0030599 pectinesterase activity IEA Interproscan
BP GO:0042545 cell wall modification IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR000070 Pectinesterase_cat 94 378
No external refs found!