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  5. Aspi01Gene59535.t1

Aspi01Gene59535.t1 (ZFN1, Aspi01Gene59535)


Aliases : ZFN1, Aspi01Gene59535

Description : regulatory protein of RNA homeostasis & original description: none


Gene families : OG0000297 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000297_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Aspi01Gene59535.t1

Target Alias Description ECC score Gene Family Method Actions
AT1G04990 No alias Zinc finger C-x8-C-x5-C-x3-H type family protein 0.05 OrthoFinder output from all 47 species
AT1G29570 No alias Zinc finger C-x8-C-x5-C-x3-H type family protein 0.03 OrthoFinder output from all 47 species
AT2G32930 ZFN2 zinc finger nuclease 2 0.03 OrthoFinder output from all 47 species
AT5G63260 No alias Zinc finger C-x8-C-x5-C-x3-H type family protein 0.03 OrthoFinder output from all 47 species
Adi_g075180 ZFN1 regulatory protein of RNA homeostasis & original... 0.03 OrthoFinder output from all 47 species
Ala_g06390 ZFN1 regulatory protein of RNA homeostasis & original... 0.03 OrthoFinder output from all 47 species
Als_g59230 ZFN1 regulatory protein of RNA homeostasis & original... 0.03 OrthoFinder output from all 47 species
Aspi01Gene29131.t1 Aspi01Gene29131 regulatory protein of RNA homeostasis & original... 0.04 OrthoFinder output from all 47 species
Cba_g04604 No alias regulatory protein of RNA homeostasis & original... 0.02 OrthoFinder output from all 47 species
Ceric.28G038200.1 Ceric.28G038200 regulatory protein of RNA homeostasis & original... 0.04 OrthoFinder output from all 47 species
Ehy_g05707 No alias regulatory protein of RNA homeostasis & original... 0.04 OrthoFinder output from all 47 species
Gb_37448 No alias C3H zinc finger transcription factor 0.01 OrthoFinder output from all 47 species
Ore_g03223 ZFN1 regulatory protein of RNA homeostasis & original... 0.03 OrthoFinder output from all 47 species
Ore_g03707 ZFN1 regulatory protein of RNA homeostasis & original... 0.03 OrthoFinder output from all 47 species
Pnu_g30586 ZFN1 regulatory protein of RNA homeostasis & original... 0.03 OrthoFinder output from all 47 species
Solyc01g067550.3.1 Solyc01g067550 C3H zinc finger transcription factor 0.03 OrthoFinder output from all 47 species
Solyc06g054620.4.1 Solyc06g054620 C3H zinc finger transcription factor 0.01 OrthoFinder output from all 47 species
Spa_g21682 No alias regulatory protein of RNA homeostasis & original... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0046872 metal ion binding IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR000571 Znf_CCCH 185 209
IPR000571 Znf_CCCH 139 163
IPR000571 Znf_CCCH 93 118
No external refs found!