Aliases : VAC1, ECB2, ATECB2, Aspi01Gene61045
Description : not classified & original description: none
Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Aspi01Gene61045.t1 | |
| Cluster | HCCA: Cluster_3 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00010p00113430 | evm_27.TU.AmTr_v1... | Pentatricopeptide repeat-containing protein At1g18485... | 0.03 | OrthoFinder output from all 47 species | |
| AMTR_s00049p00223290 | evm_27.TU.AmTr_v1... | Putative pentatricopeptide repeat-containing protein... | 0.02 | OrthoFinder output from all 47 species | |
| AMTR_s00065p00033910 | evm_27.TU.AmTr_v1... | Pentatricopeptide repeat-containing protein At3g49740... | 0.02 | OrthoFinder output from all 47 species | |
| AT2G03880 | REME1 | Pentatricopeptide repeat (PPR) superfamily protein | 0.03 | OrthoFinder output from all 47 species | |
| AT2G36730 | No alias | Pentatricopeptide repeat (PPR) superfamily protein | 0.02 | OrthoFinder output from all 47 species | |
| AT4G25270 | No alias | Tetratricopeptide repeat (TPR)-like superfamily protein | 0.03 | OrthoFinder output from all 47 species | |
| AT5G52630 | MEF1 | mitochondrial RNAediting factor 1 | 0.02 | OrthoFinder output from all 47 species | |
| Adi_g002777 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Adi_g099342 | CRR22 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aev_g07273 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ala_g12481 | OTP82 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ala_g17512 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ala_g23789 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Als_g07162 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Als_g07455 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Als_g19152 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Als_g27639 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Als_g40210 | VAC1, ECB2, ATECB2 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aob_g24083 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aob_g27561 | REME1 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aob_g27901 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aop_g28296 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Azfi_s0049.g030697 | No alias | not classified & original description: CDS=1-2361 | 0.02 | OrthoFinder output from all 47 species | |
| Azfi_s0229.g059115 | VAC1, ECB2, ATECB2 | not classified & original description: CDS=1-2115 | 0.03 | OrthoFinder output from all 47 species | |
| Cba_g07249 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Cba_g11358 | CRR2 | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Cba_g15323 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Cba_g75350 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ceric.05G093000.1 | Ceric.05G093000 | not classified & original description: pacid=50577993... | 0.02 | OrthoFinder output from all 47 species | |
| Ceric.18G049100.1 | Ceric.18G049100 | not classified & original description: pacid=50621467... | 0.02 | OrthoFinder output from all 47 species | |
| Ceric.29G083600.1 | Ceric.29G083600 | ssDNA-binding protein *(OSB) & original description:... | 0.03 | OrthoFinder output from all 47 species | |
| Ceric.30G017300.1 | Ceric.30G017300 | not classified & original description: pacid=50608904... | 0.03 | OrthoFinder output from all 47 species | |
| Ceric.36G033700.1 | Ceric.36G033700 | ssDNA-binding protein *(OSB) & original description:... | 0.03 | OrthoFinder output from all 47 species | |
| Ceric.36G058400.1 | Ceric.36G058400 | not classified & original description: pacid=50568396... | 0.02 | OrthoFinder output from all 47 species | |
| Dac_g26939 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dcu_g21341 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Dcu_g44643 | No alias | ssDNA-binding protein *(OSB) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dde_g22354 | OTP86 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dde_g46553 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ehy_g18446 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os07g46770.1 | LOC_Os07g46770 | Pentatricopeptide repeat-containing protein At4g21065... | 0.02 | OrthoFinder output from all 47 species | |
| Len_g56481 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Len_g57360 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Msp_g21065 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Msp_g26145 | CRR22 | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Nbi_g30106 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ore_g03043 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ore_g09259 | CRR2 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ore_g17858 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ore_g27030 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ppi_g05872 | EMB2758 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ppi_g07615 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0012.g005517 | CRR22 | not classified & original description: CDS=1-2004 | 0.03 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0024.g009076 | No alias | not classified & original description: CDS=1-1737 | 0.03 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0029.g010161 | No alias | not classified & original description: CDS=1-2802 | 0.03 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0042.g012770 | No alias | not classified & original description: CDS=1-1605 | 0.03 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0096.g019336 | No alias | not classified & original description: CDS=1-1245 | 0.03 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0157.g023710 | No alias | not classified & original description: CDS=112-2235 | 0.04 | OrthoFinder output from all 47 species | |
| Sam_g21461 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Sam_g34092 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Sam_g35736 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Sam_g37160 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Sam_g51760 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Spa_g06014 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Spa_g50886 | CRR22 | ssDNA-binding protein *(OSB) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Tin_g05368 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Tin_g06419 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Tin_g06463 | No alias | ssDNA-binding protein *(OSB) & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Tin_g17888 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Tin_g26293 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Tin_g29863 | EMB2261 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Tin_g29955 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Tin_g30046 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Tin_g30423 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Tin_g43910 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Zm00001e000621_P001 | CRR22, Zm00001e000621 | Pentatricopeptide repeat-containing protein At3g12770... | 0.02 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No Predicted GO terms available for this sequence |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR002885 | Pentatricopeptide_repeat | 577 | 597 |
| IPR002885 | Pentatricopeptide_repeat | 378 | 402 |
| IPR002885 | Pentatricopeptide_repeat | 403 | 452 |
| IPR002885 | Pentatricopeptide_repeat | 106 | 147 |
| IPR002885 | Pentatricopeptide_repeat | 302 | 350 |
| IPR002885 | Pentatricopeptide_repeat | 201 | 249 |
| IPR002885 | Pentatricopeptide_repeat | 501 | 549 |
| No external refs found! |
