Aspi01Gene61363.t1 (Aspi01Gene61363)


Aliases : Aspi01Gene61363

Description : not classified & original description: none


Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Aspi01Gene61363.t1

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00032p00219990 OTP84 Pentatricopeptide repeat-containing protein At3g57430,... 0.03 OrthoFinder output from all 47 species
Adi_g014360 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g016548 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g12197 OSB1 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aev_g24838 No alias ssDNA-binding protein *(OSB) & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g29330 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g42368 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g44680 OSB1 ssDNA-binding protein *(OSB) & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g09700 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g22355 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g39787 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g55325 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g61269 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g28686 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g37340 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g37979 CRR22 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g16410 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Aop_g30013 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Aop_g30728 No alias ssDNA-binding protein *(OSB) & original description: none 0.01 OrthoFinder output from all 47 species
Aop_g32921 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene43851.t1 Aspi01Gene43851 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene44451.t1 CRR2, Aspi01Gene44451 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Azfi_s0038.g026305 EMB2758 not classified & original description: CDS=1-1827 0.03 OrthoFinder output from all 47 species
Azfi_s0190.g056908 No alias not classified & original description: CDS=47-3490 0.03 OrthoFinder output from all 47 species
Azfi_s0301.g063681 REME1 not classified & original description: CDS=1-1416 0.03 OrthoFinder output from all 47 species
Cba_g06531 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g06836 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g07194 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Cba_g07786 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g11909 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g12574 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g26795 No alias ssDNA-binding protein *(OSB) & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g34546 No alias ssDNA-binding protein *(OSB) & original description: none 0.01 OrthoFinder output from all 47 species
Cba_g67421 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.04G095300.1 OTP84, Ceric.04G095300 not classified & original description: pacid=50630887... 0.04 OrthoFinder output from all 47 species
Ceric.05G093000.1 Ceric.05G093000 not classified & original description: pacid=50577993... 0.01 OrthoFinder output from all 47 species
Ceric.14G008900.1 Ceric.14G008900 not classified & original description: pacid=50634493... 0.02 OrthoFinder output from all 47 species
Ceric.22G078800.1 Ceric.22G078800 not classified & original description: pacid=50613807... 0.03 OrthoFinder output from all 47 species
Ceric.32G058000.1 Ceric.32G058000 not classified & original description: pacid=50598467... 0.04 OrthoFinder output from all 47 species
Ceric.33G050800.1 CRR22, Ceric.33G050800 not classified & original description: pacid=50606654... 0.04 OrthoFinder output from all 47 species
Cpa|evm.model.tig00000851.30 No alias Pentatricopeptide repeat-containing protein At5g61990,... 0.01 OrthoFinder output from all 47 species
Cpa|evm.model.tig00021035.24 No alias Pentatricopeptide repeat-containing protein At1g63080,... 0.01 OrthoFinder output from all 47 species
Dac_g18955 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g23468 CRR22 not classified & original description: none 0.01 OrthoFinder output from all 47 species
Dac_g30484 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g36002 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g36894 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g36070 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g45933 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g47882 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Dcu_g49796 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
GSVIVT01037944001 No alias Pentatricopeptide repeat-containing protein At1g50270... 0.01 OrthoFinder output from all 47 species
Gb_34736 No alias Pentatricopeptide repeat-containing protein At4g13650... 0.01 OrthoFinder output from all 47 species
Len_g18272 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g18520 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g21178 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g24183 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g37832 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g44142 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g54934 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g06708 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g06927 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g03152 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g28205 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g28772 No alias ssDNA-binding protein *(OSB) & original description: none 0.01 OrthoFinder output from all 47 species
Msp_g29683 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Msp_g31349 CRR22 not classified & original description: none 0.01 OrthoFinder output from all 47 species
Msp_g34455 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Msp_g38951 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Msp_g42980 No alias ssDNA-binding protein *(OSB) & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g24068 OTP86 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g25474 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Ore_g01804 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g18652 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g26690 VAC1, ECB2, ATECB2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g26843 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g38356 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Pir_g13321 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g19344 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g35599 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g01154 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g04713 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g07430 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g10348 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g22095 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g29583 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g43666 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g53207 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g53950 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g53953 EMB2758 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g57818 No alias ssDNA-binding protein *(OSB) & original description: none 0.04 OrthoFinder output from all 47 species
Sam_g02933 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g07135 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g13567 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g13631 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g17279 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g21946 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g25352 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g26606 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g26608 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g27930 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g29223 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g33428 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g33599 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g35515 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Sam_g36326 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g37186 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g37213 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g38015 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g38908 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g39629 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g46633 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Smo110409 No alias Pentatricopeptide repeat-containing protein At2g33680... 0.03 OrthoFinder output from all 47 species
Smo99677 CRR22 Pentatricopeptide repeat-containing protein At1g11290,... 0.03 OrthoFinder output from all 47 species
Solyc08g013850.1.1 CRR21, Solyc08g013850 RNA editing factor (CRR21) 0.02 OrthoFinder output from all 47 species
Tin_g05956 EMB2758 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g44215 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e000621_P001 CRR22, Zm00001e000621 Pentatricopeptide repeat-containing protein At3g12770... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 618 644
IPR002885 Pentatricopeptide_repeat 214 240
IPR002885 Pentatricopeptide_repeat 885 911
IPR002885 Pentatricopeptide_repeat 242 270
IPR002885 Pentatricopeptide_repeat 646 676
IPR002885 Pentatricopeptide_repeat 719 744
IPR002885 Pentatricopeptide_repeat 810 857
IPR002885 Pentatricopeptide_repeat 340 388
IPR002885 Pentatricopeptide_repeat 442 488
IPR002885 Pentatricopeptide_repeat 543 586
IPR002885 Pentatricopeptide_repeat 139 185
IPR046848 E_motif 929 978
No external refs found!