Aspi01Gene61369.t1 (CRR22, Aspi01Gene61369)


Aliases : CRR22, Aspi01Gene61369

Description : not classified & original description: none


Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Aspi01Gene61369.t1

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00040p00174700 evm_27.TU.AmTr_v1... Pentatricopeptide repeat-containing protein At4g13650... 0.03 OrthoFinder output from all 47 species
AMTR_s00057p00137550 evm_27.TU.AmTr_v1... Pentatricopeptide repeat-containing protein At2g36980,... 0.02 OrthoFinder output from all 47 species
AMTR_s00066p00062930 EMB2261,... Pentatricopeptide repeat-containing protein At3g49170,... 0.04 OrthoFinder output from all 47 species
AT2G20540 MEF21 mitochondrial editing factor 21 0.02 OrthoFinder output from all 47 species
AT5G59600 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.03 OrthoFinder output from all 47 species
Adi_g034009 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g056798 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g069094 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g076322 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g077235 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g089097 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g46569 REME1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g48329 OSB3 ssDNA-binding protein *(OSB) & original description: none 0.01 OrthoFinder output from all 47 species
Aev_g49175 No alias ssDNA-binding protein *(OSB) & original description: none 0.01 OrthoFinder output from all 47 species
Ala_g11401 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g12581 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g17260 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g36018 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g36105 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g38174 No alias ssDNA-binding protein *(OSB) & original description: none 0.01 OrthoFinder output from all 47 species
Als_g03840 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g04222 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g05088 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g06928 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g08654 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g14144 REME1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g18268 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g18669 EMB2758 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g30595 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g30788 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g30845 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g46291 OTP86 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g55222 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g56368 CRR22 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g60956 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g09035 EMB2758 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g24197 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g26992 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g27902 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g28217 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g30148 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g42859 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g06679 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g16384 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Aop_g16640 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Aop_g23385 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g24623 EMB2758 not classified & original description: none 0.01 OrthoFinder output from all 47 species
Aop_g35962 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Aspi01Gene04806.t1 Aspi01Gene04806 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aspi01Gene16549.t1 EMB2261, Aspi01Gene16549 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene18568.t1 Aspi01Gene18568 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aspi01Gene28051.t1 Aspi01Gene28051 cofactor of plastid-encoded RNA polymerase *(TAC9) &... 0.05 OrthoFinder output from all 47 species
Aspi01Gene34758.t1 Aspi01Gene34758 ssDNA-binding protein *(OSB) & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene51735.t1 Aspi01Gene51735 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Azfi_s0004.g008305 VAC1, ECB2, ATECB2 ssDNA-binding protein *(OSB) & original description: CDS=82-2724 0.03 OrthoFinder output from all 47 species
Azfi_s0008.g011478 No alias not classified & original description: CDS=1-2919 0.03 OrthoFinder output from all 47 species
Azfi_s0059.g034645 No alias not classified & original description: CDS=1-2358 0.02 OrthoFinder output from all 47 species
Azfi_s0090.g042642 No alias not classified & original description: CDS=39-695 0.01 OrthoFinder output from all 47 species
Azfi_s0118.g046614 No alias not classified & original description: CDS=1-2319 0.03 OrthoFinder output from all 47 species
Azfi_s0301.g063681 REME1 not classified & original description: CDS=1-1416 0.03 OrthoFinder output from all 47 species
Azfi_s0743.g084788 No alias not classified & original description: CDS=1-1605 0.02 OrthoFinder output from all 47 species
Cba_g05966 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g15873 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g19889 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g20700 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g43844 CRR2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g46020 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g56830 EMB2758 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g67233 VAC1, ECB2, ATECB2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g68955 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Cba_g77980 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.07G055500.1 Ceric.07G055500 not classified & original description: pacid=50626722... 0.03 OrthoFinder output from all 47 species
Ceric.09G007000.1 Ceric.09G007000 not classified & original description: pacid=50586983... 0.01 OrthoFinder output from all 47 species
Ceric.09G023800.1 Ceric.09G023800 not classified & original description: pacid=50587607... 0.03 OrthoFinder output from all 47 species
Ceric.11G066400.1 Ceric.11G066400 not classified & original description: pacid=50596043... 0.03 OrthoFinder output from all 47 species
Ceric.12G060700.1 Ceric.12G060700 not classified & original description: pacid=50600993... 0.03 OrthoFinder output from all 47 species
Ceric.13G082600.1 Ceric.13G082600 not classified & original description: pacid=50636923... 0.03 OrthoFinder output from all 47 species
Ceric.18G014200.1 VAC1, ECB2,... not classified & original description: pacid=50622305... 0.03 OrthoFinder output from all 47 species
Ceric.1Z254100.1 Ceric.1Z254100 not classified & original description: pacid=50632850... 0.01 OrthoFinder output from all 47 species
Ceric.25G002100.1 Ceric.25G002100 not classified & original description: pacid=50593112... 0.03 OrthoFinder output from all 47 species
Ceric.25G017300.1 Ceric.25G017300 not classified & original description: pacid=50594270... 0.02 OrthoFinder output from all 47 species
Ceric.32G071400.1 CRR22, Ceric.32G071400 not classified & original description: pacid=50598182... 0.02 OrthoFinder output from all 47 species
Ceric.35G003800.1 Ceric.35G003800 not classified & original description: pacid=50581275... 0.03 OrthoFinder output from all 47 species
Dac_g23468 CRR22 not classified & original description: none 0.01 OrthoFinder output from all 47 species
Dcu_g06287 CRR2 not classified & original description: none 0.01 OrthoFinder output from all 47 species
Dcu_g12787 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Dcu_g37654 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g38857 No alias ssDNA-binding protein *(OSB) & original description: none 0.01 OrthoFinder output from all 47 species
Dcu_g50014 No alias ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g15725 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Dde_g24658 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g39002 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01000034001 MEF19 Putative pentatricopeptide repeat-containing protein... 0.02 OrthoFinder output from all 47 species
LOC_Os03g52475.1 LOC_Os03g52475 Pentatricopeptide repeat-containing protein At3g28660... 0.02 OrthoFinder output from all 47 species
LOC_Os06g48660.1 LOC_Os06g48660 Pentatricopeptide repeat-containing protein At4g14820... 0.01 OrthoFinder output from all 47 species
LOC_Os07g31000.1 LOC_Os07g31000 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
LOC_Os10g40920.1 LOC_Os10g40920 RNA editing factor (MEF13) 0.03 OrthoFinder output from all 47 species
Len_g09617 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Len_g18438 No alias ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Len_g18988 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g25859 REME1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g54471 LPA66 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g07068 CRR22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g07681 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g10139 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g40602 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
MA_138689g0010 OTP84 Pentatricopeptide repeat-containing protein At2g27610... 0.02 OrthoFinder output from all 47 species
Msp_g12368 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Msp_g14157 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g17699 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Msp_g22299 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Msp_g22363 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Msp_g22512 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g28772 No alias ssDNA-binding protein *(OSB) & original description: none 0.01 OrthoFinder output from all 47 species
Msp_g31656 OTP86 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g34233 REME1 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g34234 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g35189 OTP84 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Msp_g36814 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Msp_g41127 REME1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Msp_g46847 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g47291 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g48629 EMB2758 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g03798 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Nbi_g06660 CRR2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g06724 OTP86 not classified & original description: none 0.01 OrthoFinder output from all 47 species
Nbi_g21420 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g23765 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g27841 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g38399 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Nbi_g41047 OTP84 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g05196 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g07306 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g09990 OTP84 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g27667 VAC1, ECB2, ATECB2 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g44735 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g30877 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g57416 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g57665 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g57973 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g63120 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g03458 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Ppi_g03779 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g05733 REME1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g08487 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g09076 No alias ssDNA-binding protein *(OSB) & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g13334 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g17170 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g17797 CRR22 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g32097 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g44678 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g53563 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g53950 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g53961 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0021.g008413 No alias not classified & original description: CDS=1-1578 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0036.g011560 No alias not classified & original description: CDS=661-2424 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0055.g014482 No alias not classified & original description: CDS=1-1119 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0055.g014492 No alias not classified & original description: CDS=1-2247 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0072.g016959 No alias not classified & original description: CDS=1-1596 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0080.g017968 No alias not classified & original description: CDS=1-2673 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0151.g023411 REME1 not classified & original description: CDS=1-1494 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0199.g025568 No alias not classified & original description: CDS=1-2793 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0223.g026268 No alias not classified & original description: CDS=1-2328 0.03 OrthoFinder output from all 47 species
Sam_g03859 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g04999 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g06265 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g11848 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g15980 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g16371 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g26571 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g27568 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g27632 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g37902 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g50518 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g50801 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Smo82072 OTP84 Pentatricopeptide repeat-containing protein At3g57430,... 0.03 OrthoFinder output from all 47 species
Smo92008 No alias Pentatricopeptide repeat-containing protein At3g09040,... 0.03 OrthoFinder output from all 47 species
Solyc12g096680.1.1 REME1, Solyc12g096680 Pentatricopeptide repeat-containing protein At2g03880,... 0.03 OrthoFinder output from all 47 species
Spa_g32996 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g45261 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g45537 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g06419 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Tin_g08462 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Tin_g17888 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g26996 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g28558 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g46234 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0008270 zinc ion binding IEA Interproscan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 73 98
IPR002885 Pentatricopeptide_repeat 101 131
IPR002885 Pentatricopeptide_repeat 290 320
IPR046848 E_motif 341 401
IPR002885 Pentatricopeptide_repeat 221 269
IPR032867 DYW_dom 445 526
No external refs found!