1. Home
  2. Species
  3. Alsophila spinulosa
  4. Sequence
  5. Aspi01Gene62001.t1

Aspi01Gene62001.t1 (AGO3, Aspi01Gene62001)


Aliases : AGO3, Aspi01Gene62001

Description : not classified & original description: none


Gene families : OG0000157 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000157_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Aspi01Gene62001.t1

Target Alias Description ECC score Gene Family Method Actions
AT1G31290 AGO3 ARGONAUTE 3 0.02 OrthoFinder output from all 47 species
Adi_g013023 AGO1 regulatory protein *(AGO7) of transacting siRNA pathway... 0.04 OrthoFinder output from all 47 species
Adi_g049547 AGO1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g113326 AGO1 miRNA recruiting factor (AGO) of RNA-induced silencing... 0.03 OrthoFinder output from all 47 species
Aev_g10073 AGO1 regulatory protein *(AGO7) of transacting siRNA pathway... 0.04 OrthoFinder output from all 47 species
Aev_g28185 AGO1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g14664 AGO1 miRNA recruiting factor (AGO) of RNA-induced silencing... 0.03 OrthoFinder output from all 47 species
Als_g60456 AGO7, ZIP not classified & original description: none 0.01 OrthoFinder output from all 47 species
Aop_g10666 AGO1 not classified & original description: none 0.01 OrthoFinder output from all 47 species
Aspi01Gene19810.t1 AGO7, ZIP,... not classified & original description: none 0.07 OrthoFinder output from all 47 species
Aspi01Gene28463.t2 Aspi01Gene28463 not classified & original description: none 0.07 OrthoFinder output from all 47 species
Aspi01Gene29036.t1 AGO4, OCP11,... siRNA-integrating factor *(AGO) & original description: none 0.05 OrthoFinder output from all 47 species
Aspi01Gene59574.t1 AGO1, Aspi01Gene59574 miRNA recruiting factor (AGO) of RNA-induced silencing... 0.05 OrthoFinder output from all 47 species
Aspi01Gene61220.t1 AGO1, Aspi01Gene61220 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Gb_20550 AGO7, ZIP siRNA-binding factor (AGO2) of non-canonical RdDM pathway 0.03 OrthoFinder output from all 47 species
Ore_g05462 AGO1 regulatory protein *(AGO7) of transacting siRNA pathway... 0.03 OrthoFinder output from all 47 species
Pp3c17_350V3.1 AGO1, Pp3c17_350 Stabilizer of iron transporter SufD / Polynucleotidyl transferase 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0026.g009481 AGO1 not classified & original description: CDS=370-3495 0.03 OrthoFinder output from all 47 species
Sam_g25176 No alias siRNA-integrating factor *(AGO) & original description: none 0.04 OrthoFinder output from all 47 species
Smo110151 AGO1 Chromatin organisation.DNA methylation.canonical... 0.03 OrthoFinder output from all 47 species
Solyc01g010970.3.1 AGO7, ZIP, Solyc01g010970 Protein argonaute 7 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Spa_g27914 AGO1 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g30174 AGO1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e016179_P001 PNH, AGO10, ZLL,... Protein argonaute MEL1 OS=Oryza sativa subsp. japonica... 0.02 OrthoFinder output from all 47 species
Zm00001e037347_P002 PNH, AGO10, ZLL,... RIS-Complex miRNA recruiting factor (AGO1) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR032473 Argonaute_Mid_dom 445 506
IPR032474 Argonaute_N 199 325
IPR003165 Piwi 551 674
No external refs found!