Aspi01Gene62048.t1 (PGP2, Aspi01Gene62048)

Aliases : PGP2, Aspi01Gene62048

Description : subfamily ABCB transporter & original description: none

Gene families : OG0000048 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Aspi01Gene62048.t1
Cluster	HCCA: Cluster_40

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00007p00263610	ABCB19,...	Solute transport.primary active transport.ABC...	0.02	OrthoFinder output from all 47 species
AMTR_s00045p00109940	PGP11,...	Solute transport.primary active transport.ABC...	0.03	OrthoFinder output from all 47 species
AT2G39480	PGP6	P-glycoprotein 6	0.03	OrthoFinder output from all 47 species
AT3G55320	PGP20	P-glycoprotein 20	0.03	OrthoFinder output from all 47 species
Adi_g088971	No alias	subfamily ABCB transporter & original description: none	0.05	OrthoFinder output from all 47 species
Aev_g39147	No alias	subfamily ABCB transporter & original description: none	0.03	OrthoFinder output from all 47 species
Aspi01Gene08454.t1	PGP11, Aspi01Gene08454	subfamily ABCB transporter & original description: none	0.05	OrthoFinder output from all 47 species
Aspi01Gene43896.t1	PGP6, Aspi01Gene43896	subfamily ABCB transporter & original description: none	0.07	OrthoFinder output from all 47 species
Ceric.07G010800.1	PGP11, Ceric.07G010800	subfamily ABCB transporter & original description:...	0.01	OrthoFinder output from all 47 species
Dde_g30302	PGP2	subfamily ABCB transporter & original description: none	0.03	OrthoFinder output from all 47 species
GSVIVT01017696001	PGP11	Solute transport.primary active transport.ABC...	0.03	OrthoFinder output from all 47 species
Gb_13909	PGP2	ABC transporter B family member 2 OS=Arabidopsis...	0.01	OrthoFinder output from all 47 species
LOC_Os08g45030.1	PGP1, ABCB1,...	subfamily ABCB transporter	0.02	OrthoFinder output from all 47 species
MA_111099g0010	No alias	subfamily ABCB transporter	0.02	OrthoFinder output from all 47 species
MA_114017g0010	No alias	subfamily ABCB transporter	0.01	OrthoFinder output from all 47 species
MA_3448627g0010	No alias	no hits & (original description: none)	0.02	OrthoFinder output from all 47 species
Msp_g19766	PGP2	subfamily ABCB transporter & original description: none	0.04	OrthoFinder output from all 47 species
Nbi_g08816	ABCB19,...	subfamily ABCB transporter & original description: none	0.04	OrthoFinder output from all 47 species
Nbi_g19754	ABCB19,...	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Ore_g38555	ABCB19,...	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Pnu_g12991	ABCB19,...	subfamily ABCB transporter & original description: none	0.02	OrthoFinder output from all 47 species
Pnu_g16181	PGP11	subfamily ABCB transporter & original description: none	0.03	OrthoFinder output from all 47 species
Smo84555	ABCB19,...	Solute transport.primary active transport.ABC...	0.01	OrthoFinder output from all 47 species
Solyc03g005860.4.1	PGP11, Solyc03g005860	subfamily ABCB transporter	0.03	OrthoFinder output from all 47 species
Solyc06g009280.1.1	PGP11, Solyc06g009280	subfamily ABCB transporter	0.03	OrthoFinder output from all 47 species
Solyc11g067300.2.1	PGP11, Solyc11g067300	subfamily ABCB transporter	0.03	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005215	transporter activity	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005524	ATP binding	IEA	Interproscan
CC	GO:0005575	cellular_component	None	Extended
BP	GO:0006810	transport	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009987	cellular process	None	Extended
MF	GO:0015399	primary active transmembrane transporter activity	None	Extended
CC	GO:0016020	membrane	IEA	Interproscan
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0022804	active transmembrane transporter activity	None	Extended
MF	GO:0022857	transmembrane transporter activity	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0042626	ATPase-coupled transmembrane transporter activity	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
BP	GO:0051179	localization	None	Extended
BP	GO:0051234	establishment of localization	None	Extended
BP	GO:0055085	transmembrane transport	IEA	Interproscan
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
MF	GO:0140359	ABC-type transporter activity	IEA	Interproscan
MF	GO:0140657	ATP-dependent activity	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

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Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR011527	ABC1_TM_dom	426	695
IPR003439	ABC_transporter-like_ATP-bd	764	912
IPR003439	ABC_transporter-like_ATP-bd	88	237

External Links

No external refs found!

Aspi01Gene62048.t1 (PGP2, Aspi01Gene62048)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation