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  5. Aspi01Gene62285.t1

Aspi01Gene62285.t1 (ATMBD6, MBD6, Aspi01Gene62285)


Aliases : ATMBD6, MBD6, Aspi01Gene62285

Description : methylation reader *(MBD5-6) & original description: none


Gene families : OG0000559 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000559_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Aspi01Gene62285.t1
Cluster HCCA: Cluster_139

Target Alias Description ECC score Gene Family Method Actions
Ala_g14271 No alias methylation reader *(MBD5-6) & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g27247 MBD05, MBD5, ATMBD5 methylation reader *(MBD5-6) & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0094.g043457 ATMBD6, MBD6 methylation reader *(MBD5-6) & original description: CDS=464-2743 0.01 OrthoFinder output from all 47 species
Azfi_s0158.g053875 MBD05, MBD5, ATMBD5 methylation reader *(MBD5-6) & original description: CDS=259-3537 0.03 OrthoFinder output from all 47 species
Ceric.08G019600.1 ATMBD6, MBD6,... not classified & original description: pacid=50637929... 0.04 OrthoFinder output from all 47 species
Dac_g10163 No alias methylation reader *(MBD5-6) & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g16213 MBD05, MBD5, ATMBD5 methylation reader *(MBD5-6) & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01025031001 ATMBD7, MBD7 Chromatin organisation.DNA methylation.ROS1-mediated DNA... 0.02 OrthoFinder output from all 47 species
Ppi_g09473 MBD05, MBD5, ATMBD5 methylation reader *(MBD5-6) & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g16545 No alias methylation reader *(MBD5-6) & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g18250 No alias methylation reader *(MBD5-6) & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g55639 ATMBD6, MBD6 methylation reader *(MBD5-6) & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR001739 Methyl_CpG_DNA-bd 426 475
No external refs found!