Aliases : Aspi01Gene63349
Description : not classified & original description: none
Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Aspi01Gene63349.t1 | |
| Cluster | HCCA: Cluster_119 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00003p00175270 | evm_27.TU.AmTr_v1... | Pentatricopeptide repeat-containing protein At1g31790... | 0.03 | OrthoFinder output from all 47 species | |
| AMTR_s00025p00155620 | evm_27.TU.AmTr_v1... | Pentatricopeptide repeat-containing protein At4g33170... | 0.02 | OrthoFinder output from all 47 species | |
| AMTR_s00081p00056740 | OTP82,... | Pentatricopeptide repeat-containing protein At1g08070,... | 0.02 | OrthoFinder output from all 47 species | |
| AMTR_s00129p00082590 | evm_27.TU.AmTr_v1... | Pentatricopeptide repeat-containing protein At1g19720... | 0.03 | OrthoFinder output from all 47 species | |
| AT1G15510 | VAC1, ECB2, ATECB2 | Tetratricopeptide repeat (TPR)-like superfamily protein | 0.04 | OrthoFinder output from all 47 species | |
| AT3G08820 | No alias | Pentatricopeptide repeat (PPR) superfamily protein | 0.02 | OrthoFinder output from all 47 species | |
| AT5G44785 | OSB3 | organellar single-stranded DNA binding protein 3 | 0.03 | OrthoFinder output from all 47 species | |
| Adi_g003764 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Adi_g005231 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Adi_g005655 | CRR22 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Adi_g007037 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Adi_g010601 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Adi_g099272 | EMB2758 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Adi_g102636 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Adi_g108175 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ala_g26450 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ala_g32458 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Als_g54909 | No alias | ssDNA-binding protein *(OSB) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aob_g07960 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aob_g12691 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aob_g37112 | CRR22 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aob_g37979 | CRR22 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aop_g04156 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aop_g63229 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Azfi_s0042.g026834 | No alias | not classified & original description: CDS=1-1929 | 0.03 | OrthoFinder output from all 47 species | |
| Azfi_s0079.g038406 | OTP86 | not classified & original description: CDS=1-2394 | 0.03 | OrthoFinder output from all 47 species | |
| Cba_g06233 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Cba_g07112 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Cba_g07718 | CRR22 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Cba_g18809 | CRR22 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Cba_g19059 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Cba_g23385 | CRR22 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Cba_g31382 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Cba_g33383 | CRR22 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ceric.01G062600.1 | Ceric.01G062600 | not classified & original description: pacid=50592906... | 0.03 | OrthoFinder output from all 47 species | |
| Ceric.07G078100.1 | OTP84, Ceric.07G078100 | not classified & original description: pacid=50626860... | 0.02 | OrthoFinder output from all 47 species | |
| Ceric.12G036800.1 | Ceric.12G036800 | not classified & original description: pacid=50601765... | 0.03 | OrthoFinder output from all 47 species | |
| Ceric.20G015100.1 | Ceric.20G015100 | not classified & original description: pacid=50567311... | 0.03 | OrthoFinder output from all 47 species | |
| Ceric.21G054200.1 | Ceric.21G054200 | not classified & original description: pacid=50602892... | 0.03 | OrthoFinder output from all 47 species | |
| Ceric.22G078800.1 | Ceric.22G078800 | not classified & original description: pacid=50613807... | 0.03 | OrthoFinder output from all 47 species | |
| Cpa|evm.model.tig00000851.30 | No alias | Pentatricopeptide repeat-containing protein At5g61990,... | 0.01 | OrthoFinder output from all 47 species | |
| Dac_g30165 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dac_g30435 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Dcu_g06831 | PTAC9, OSB2 | ssDNA-binding protein *(OSB) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Dde_g06677 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| LOC_Os03g44210.2 | LOC_Os03g44210 | RNA editing factor (SEL1/PDM1) | 0.03 | OrthoFinder output from all 47 species | |
| Lfl_g07796 | CRR22 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Lfl_g18339 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Lfl_g33055 | DOT4 | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| MA_4438g0010 | CRR22 | Pentatricopeptide repeat-containing protein At1g11290,... | 0.03 | OrthoFinder output from all 47 species | |
| MA_525914g0010 | CRR22 | Pentatricopeptide repeat-containing protein At1g11290,... | 0.03 | OrthoFinder output from all 47 species | |
| MA_653417g0010 | OTP84 | Pentatricopeptide repeat-containing protein At3g57430,... | 0.03 | OrthoFinder output from all 47 species | |
| MA_82569g0020 | CRR22 | Pentatricopeptide repeat-containing protein At1g11290,... | 0.02 | OrthoFinder output from all 47 species | |
| Msp_g22928 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Nbi_g06230 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Nbi_g06654 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Nbi_g06798 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Nbi_g13927 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Nbi_g19527 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Nbi_g27965 | No alias | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Nbi_g32642 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Nbi_g39306 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ore_g34092 | CRR22 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Pir_g57699 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Pnu_g33734 | VAC1, ECB2, ATECB2 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ppi_g03894 | EMB2758 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ppi_g33169 | CRR22 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ppi_g56225 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0001.g000561 | No alias | not classified & original description: CDS=191-3046 | 0.03 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0089.g018665 | No alias | not classified & original description: CDS=8-2563 | 0.03 | OrthoFinder output from all 47 species | |
| Sam_g01747 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Sam_g12066 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Sam_g14049 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Sam_g19460 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Sam_g29223 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Sam_g36339 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Sam_g36697 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Sam_g39247 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Sam_g50534 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Smo74842 | OTP86 | Pentatricopeptide repeat-containing protein At3g57430,... | 0.03 | OrthoFinder output from all 47 species | |
| Solyc01g095690.2.1 | Solyc01g095690 | Pentatricopeptide repeat-containing protein At4g01030,... | 0.02 | OrthoFinder output from all 47 species | |
| Spa_g18079 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Spa_g25363 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Spa_g38609 | REME1 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Spa_g50449 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Spa_g55591 | CRR2 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Tin_g14007 | MEF1 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Tin_g17148 | VAC1, ECB2, ATECB2 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Tin_g23011 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Zm00001e002552_P001 | Zm00001e002552 | RNA editing factor (SEL1/PDM1) | 0.02 | OrthoFinder output from all 47 species | |
| Zm00001e011467_P004 | emb1899, EMB175,... | Pentatricopeptide repeat-containing protein At5g03800... | 0.02 | OrthoFinder output from all 47 species | |
| Zm00001e021457_P001 | CRR22, Zm00001e021457 | Pentatricopeptide repeat-containing protein At1g11290,... | 0.03 | OrthoFinder output from all 47 species | |
| Zm00001e023498_P001 | VAC1, ECB2,... | Putative pentatricopeptide repeat-containing protein... | 0.03 | OrthoFinder output from all 47 species | |
| Zm00001e031351_P001 | EMB2261, Zm00001e031351 | RNA editing factor (ECD1) | 0.02 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No Predicted GO terms available for this sequence |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR046848 | E_motif | 708 | 769 |
| IPR002885 | Pentatricopeptide_repeat | 490 | 537 |
| IPR002885 | Pentatricopeptide_repeat | 297 | 344 |
| IPR002885 | Pentatricopeptide_repeat | 196 | 243 |
| IPR002885 | Pentatricopeptide_repeat | 591 | 638 |
| IPR046849 | Eplus_motif | 775 | 796 |
| IPR002885 | Pentatricopeptide_repeat | 464 | 489 |
| IPR002885 | Pentatricopeptide_repeat | 395 | 424 |
| IPR002885 | Pentatricopeptide_repeat | 666 | 689 |
| No external refs found! |
