Aliases : EMB2261, Aspi01Gene63595
Description : not classified & original description: none
Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Aspi01Gene63595.t1 | |
| Cluster | HCCA: Cluster_138 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00010p00113430 | evm_27.TU.AmTr_v1... | Pentatricopeptide repeat-containing protein At1g18485... | 0.02 | OrthoFinder output from all 47 species | |
| AMTR_s00057p00199190 | No alias | Pentatricopeptide repeat-containing protein At4g15720... | 0.03 | OrthoFinder output from all 47 species | |
| AMTR_s00084p00089150 | OTP86,... | Pentatricopeptide repeat-containing protein At3g63370,... | 0.02 | OrthoFinder output from all 47 species | |
| AT1G31010 | OSB4 | organellar single-stranded DNA binding protein 4 | 0.02 | OrthoFinder output from all 47 species | |
| AT2G40720 | No alias | Tetratricopeptide repeat (TPR)-like superfamily protein | 0.03 | OrthoFinder output from all 47 species | |
| AT3G61170 | No alias | Tetratricopeptide repeat (TPR)-like superfamily protein | 0.02 | OrthoFinder output from all 47 species | |
| Adi_g038036 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Adi_g101336 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Adi_g102361 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aev_g07716 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ala_g24239 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ala_g27661 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ala_g28362 | VAC1, ECB2, ATECB2 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ala_g30371 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Ala_g38819 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Als_g05671 | CRR22 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Als_g33246 | EMB2758 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Als_g38696 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aob_g06731 | CRR22 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aob_g34282 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aop_g13134 | OTP84 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aop_g16806 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Aop_g23988 | CRR22 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aop_g28417 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aop_g28486 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aop_g29708 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aop_g39230 | OTP84 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aspi01Gene34804.t1 | Aspi01Gene34804 | ssDNA-binding protein *(OSB) & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Aspi01Gene44213.t1 | Aspi01Gene44213 | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Azfi_s0016.g014262 | No alias | not classified & original description: CDS=1-4500 | 0.03 | OrthoFinder output from all 47 species | |
| Azfi_s0020.g015372 | OTP86 | not classified & original description: CDS=1-2592 | 0.03 | OrthoFinder output from all 47 species | |
| Azfi_s0022.g016134 | OTP84 | not classified & original description: CDS=1-2358 | 0.02 | OrthoFinder output from all 47 species | |
| Azfi_s0042.g026834 | No alias | not classified & original description: CDS=1-1929 | 0.03 | OrthoFinder output from all 47 species | |
| Azfi_s0068.g036422 | No alias | not classified & original description: CDS=1-2670 | 0.03 | OrthoFinder output from all 47 species | |
| Azfi_s0245.g060017 | No alias | not classified & original description: CDS=1-2076 | 0.02 | OrthoFinder output from all 47 species | |
| Azfi_s0349.g066524 | No alias | ssDNA-binding protein *(OSB) & original description: CDS=117-392 | 0.03 | OrthoFinder output from all 47 species | |
| Azfi_s1334.g101644 | No alias | not classified & original description: CDS=1-3543 | 0.02 | OrthoFinder output from all 47 species | |
| Azfi_s4317.g118724 | No alias | not classified & original description: CDS=1-465 | 0.02 | OrthoFinder output from all 47 species | |
| Cba_g12814 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Cba_g20884 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Cba_g24308 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Cba_g29878 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Cba_g31665 | EMB2758 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Cba_g34541 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Cba_g75329 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ceric.23G075300.1 | Ceric.23G075300 | not classified & original description: pacid=50609898... | 0.04 | OrthoFinder output from all 47 species | |
| Dac_g03777 | EMB2758 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dac_g35515 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Dde_g06719 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Dde_g25432 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| GSVIVT01029254001 | OSB4 | RNA biosynthesis.organelle machineries.RNA polymerase... | 0.02 | OrthoFinder output from all 47 species | |
| LOC_Os07g44170.1 | EMB2758, LOC_Os07g44170 | Pentatricopeptide repeat-containing protein At4g33990... | 0.02 | OrthoFinder output from all 47 species | |
| Len_g03400 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Len_g05447 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Len_g16246 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Len_g18057 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Len_g18062 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Len_g34158 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Lfl_g17485 | OTP84 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| MA_11138g0010 | No alias | Putative pentatricopeptide repeat-containing protein... | 0.02 | OrthoFinder output from all 47 species | |
| MA_794605g0010 | CRR22 | Pentatricopeptide repeat-containing protein At1g11290,... | 0.03 | OrthoFinder output from all 47 species | |
| Msp_g24627 | OTP84 | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Msp_g41395 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Msp_g46446 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Nbi_g06724 | OTP86 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Nbi_g15701 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Nbi_g19047 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Nbi_g24055 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Nbi_g25474 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Nbi_g32180 | EMB2758 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ore_g12671 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ore_g19382 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ore_g29175 | OTP84 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ore_g33905 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Pnu_g04516 | REME1 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ppi_g32250 | CRR2 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0087.g018498 | No alias | not classified & original description: CDS=87-2291 | 0.03 | OrthoFinder output from all 47 species | |
| Sam_g03099 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Sam_g26236 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Sam_g50176 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Sam_g51690 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Solyc09g009790.4.1 | Solyc09g009790 | Putative pentatricopeptide repeat-containing protein... | 0.02 | OrthoFinder output from all 47 species | |
| Spa_g44822 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Tin_g04082 | CRR22 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Tin_g23118 | VAC1, ECB2, ATECB2 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Tin_g38392 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No Predicted GO terms available for this sequence |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR002885 | Pentatricopeptide_repeat | 227 | 273 |
| IPR002885 | Pentatricopeptide_repeat | 530 | 577 |
| IPR002885 | Pentatricopeptide_repeat | 428 | 476 |
| IPR046848 | E_motif | 750 | 811 |
| IPR002885 | Pentatricopeptide_repeat | 201 | 226 |
| IPR002885 | Pentatricopeptide_repeat | 331 | 360 |
| IPR002885 | Pentatricopeptide_repeat | 634 | 664 |
| IPR002885 | Pentatricopeptide_repeat | 670 | 696 |
| IPR002885 | Pentatricopeptide_repeat | 606 | 627 |
| IPR002885 | Pentatricopeptide_repeat | 403 | 423 |
| IPR002885 | Pentatricopeptide_repeat | 125 | 155 |
| IPR002885 | Pentatricopeptide_repeat | 296 | 324 |
| IPR002885 | Pentatricopeptide_repeat | 699 | 731 |
| No external refs found! |
