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  5. Aspi01Gene64433.t1

Aspi01Gene64433.t1 (ATEXPA4, ATEXP4,...)


Aliases : ATEXPA4, ATEXP4, EXPA4, ATHEXP ALPHA 1.6, Aspi01Gene64433

Description : alpha-class expansin & original description: none


Gene families : OG0000032 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Aspi01Gene64433.t1
Cluster HCCA: Cluster_132

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00001p00115760 ATEXP7, EXPA7,... Cell wall.cell wall proteins.expansins.alpha-type expansin 0.02 OrthoFinder output from all 47 species
Adi_g007240 ATEXPA10,... alpha-class expansin & original description: none 0.03 OrthoFinder output from all 47 species
Als_g52203 EXP15, ATEXPA15,... alpha-class expansin & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0004.g008552 LPA66 alpha-class expansin & original description: CDS=75-848 0.03 OrthoFinder output from all 47 species
Azfi_s0035.g025583 No alias alpha-class expansin & original description: CDS=1111-1770 0.03 OrthoFinder output from all 47 species
Dde_g06716 ATEXPA3, EXP3,... alpha-class expansin & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g11205 ATEXPA1, EXP1,... alpha-class expansin & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g22080 EXPB3, ATEXPB3,... not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g10345 ATEXPA10,... alpha-class expansin & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g17657 ATEXPA10,... alpha-class expansin & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g14482 ATEXPA10,... alpha-class expansin & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e005019_P001 ATHEXP BETA 1.4,... Expansin-B12 OS=Oryza sativa subsp. japonica... 0.02 OrthoFinder output from all 47 species
Zm00001e036907_P001 ATHEXP BETA 1.4,... Putative expansin-B14 OS=Oryza sativa subsp. japonica... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR007117 Expansin_CBD 164 241
IPR009009 RlpA-like_DPBB 66 153
No external refs found!