Aliases : PUB8, B80, Aspi01Gene65975
Description : E3 ubiquitin ligase *(PUB8) & original description: none
Gene families : OG0000092 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000092_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00001p00030110 | PUB15,... | U-box domain-containing protein 15 OS=Arabidopsis thaliana | 0.03 | OrthoFinder output from all 47 species | |
| AMTR_s00007p00217990 | evm_27.TU.AmTr_v1... | U-box domain-containing protein 16 OS=Arabidopsis thaliana | 0.05 | OrthoFinder output from all 47 species | |
| AMTR_s00072p00171260 | PUB14, ATPUB14,... | Protein degradation.peptide tagging.Ubiquitin... | 0.04 | OrthoFinder output from all 47 species | |
| AMTR_s00086p00031680 | evm_27.TU.AmTr_v1... | U-box domain-containing protein 4 OS=Arabidopsis thaliana | 0.02 | OrthoFinder output from all 47 species | |
| AT1G29340 | ATPUB17, PUB17 | plant U-box 17 | 0.03 | OrthoFinder output from all 47 species | |
| Adi_g009234 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Adi_g017517 | ATPUB17, PUB17 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Adi_g026489 | No alias | E3 ubiquitin ligase & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Adi_g083407 | PUB13, ATPUB13 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Adi_g102535 | ATPUB17, PUB17 | not classified & original description: none | 0.06 | OrthoFinder output from all 47 species | |
| Aev_g04770 | PUB8, B80 | E3 ubiquitin ligase *(PUB8) & original description: none | 0.07 | OrthoFinder output from all 47 species | |
| Aev_g05159 | PUB12, AtPUB12 | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Aev_g09883 | No alias | not classified & original description: none | 0.06 | OrthoFinder output from all 47 species | |
| Ala_g07408 | ATPUB17, PUB17 | E3 ubiquitin ligase & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Ala_g08869 | PUB15 | not classified & original description: none | 0.07 | OrthoFinder output from all 47 species | |
| Als_g03799 | ATPUB17, PUB17 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Als_g07222 | PUB8, B80 | E3 ubiquitin ligase *(PUB8) & original description: none | 0.07 | OrthoFinder output from all 47 species | |
| Als_g16049 | ATPUB17, PUB17 | E3 ubiquitin ligase & original description: none | 0.07 | OrthoFinder output from all 47 species | |
| Als_g16594 | PUB14, ATPUB14 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aob_g01685 | PUB8, B80 | E3 ubiquitin ligase *(PUB8) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aob_g17483 | PUB15 | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Aob_g19238 | ATPUB17, PUB17 | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Aop_g10750 | No alias | E3 ubiquitin ligase & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aop_g19192 | ATPUB17, PUB17 | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Aop_g60695 | ATPUB17, PUB17 | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Aspi01Gene44182.t1 | ATPUB17, PUB17,... | E3 ubiquitin ligase & original description: none | 0.06 | OrthoFinder output from all 47 species | |
| Azfi_s0001.g000295 | No alias | not classified & original description: CDS=1-2304 | 0.04 | OrthoFinder output from all 47 species | |
| Azfi_s2299.g110335 | PUB14, ATPUB14 | not classified & original description: CDS=293-1597 | 0.04 | OrthoFinder output from all 47 species | |
| Ceric.08G025000.1 | Ceric.08G025000 | not classified & original description: pacid=50638405... | 0.04 | OrthoFinder output from all 47 species | |
| Ceric.10G010300.1 | ATPUB17, PUB17,... | not classified & original description: pacid=50611933... | 0.06 | OrthoFinder output from all 47 species | |
| Ceric.13G074400.1 | ATPUB17, PUB17,... | E3 ubiquitin ligase & original description:... | 0.04 | OrthoFinder output from all 47 species | |
| Ceric.34G042900.1 | PUB13, ATPUB13,... | not classified & original description: pacid=50623547... | 0.03 | OrthoFinder output from all 47 species | |
| Dac_g02154 | PUB8, B80 | E3 ubiquitin ligase *(PUB8) & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Dac_g08066 | ATPUB17, PUB17 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dac_g32706 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dac_g35977 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Dac_g36575 | PUB13, ATPUB13 | E3 ubiquitin ligase & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dac_g39000 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Dde_g39767 | PUB8, B80 | E3 ubiquitin ligase *(PUB8) & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Ehy_g02654 | No alias | E3 ubiquitin ligase & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ehy_g02800 | PUB13, ATPUB13 | E3 ubiquitin ligase & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Ehy_g06164 | ATPUB17, PUB17 | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Ehy_g11164 | PUB12, AtPUB12 | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Ehy_g22153 | PUB13, ATPUB13 | E3 ubiquitin ligase & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Ehy_g29208 | PUB13, ATPUB13 | E3 ubiquitin ligase & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| GSVIVT01007275001 | PUB9, ATPUB9 | Protein degradation.peptide tagging.Ubiquitin... | 0.03 | OrthoFinder output from all 47 species | |
| GSVIVT01009347001 | No alias | U-box domain-containing protein 4 OS=Arabidopsis thaliana | 0.04 | OrthoFinder output from all 47 species | |
| GSVIVT01016225001 | PUB14, ATPUB14 | U-box domain-containing protein 14 OS=Arabidopsis thaliana | 0.04 | OrthoFinder output from all 47 species | |
| GSVIVT01020229001 | No alias | Protein degradation.peptide tagging.Ubiquitin... | 0.07 | OrthoFinder output from all 47 species | |
| GSVIVT01021265001 | ATPUB17, PUB17 | U-box domain-containing protein 17 OS=Arabidopsis thaliana | 0.04 | OrthoFinder output from all 47 species | |
| GSVIVT01030205001 | No alias | U-box domain-containing protein 16 OS=Arabidopsis thaliana | 0.04 | OrthoFinder output from all 47 species | |
| GSVIVT01036669001 | No alias | U-box domain-containing protein 4 OS=Arabidopsis thaliana | 0.03 | OrthoFinder output from all 47 species | |
| Gb_10627 | PUB8, B80 | U-box domain-containing protein 13 OS=Arabidopsis... | 0.05 | OrthoFinder output from all 47 species | |
| Gb_10871 | ATPUB17, PUB17 | E3 ubiquitin ligase (PUB) | 0.04 | OrthoFinder output from all 47 species | |
| Gb_20805 | ATPUB17, PUB17 | E3 ubiquitin ligase (PUB) | 0.05 | OrthoFinder output from all 47 species | |
| Gb_24091 | PUB9, ATPUB9 | U-box domain-containing protein 14 OS=Arabidopsis... | 0.06 | OrthoFinder output from all 47 species | |
| Gb_29276 | ATPUB17, PUB17 | E3 ubiquitin ligase (PUB) | 0.04 | OrthoFinder output from all 47 species | |
| LOC_Os01g72600.1 | LOC_Os01g72600 | no hits & (original description: none) | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os05g39930.1 | LOC_Os05g39930 | U-box domain-containing protein 16 OS=Arabidopsis... | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os06g01304.1 | PUB14, ATPUB14,... | E3 ubiquitin ligase (PUB) | 0.04 | OrthoFinder output from all 47 species | |
| Len_g08149 | ATPUB17, PUB17 | E3 ubiquitin ligase & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Lfl_g04790 | PUB14, ATPUB14 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| MA_84321g0010 | PUB13, ATPUB13 | E3 ubiquitin ligase (PUB) | 0.04 | OrthoFinder output from all 47 species | |
| MA_9917294g0010 | ATPUB17, PUB17 | E3 ubiquitin ligase (PUB) | 0.03 | OrthoFinder output from all 47 species | |
| Msp_g01206 | ATPUB17, PUB17 | E3 ubiquitin ligase & original description: none | 0.07 | OrthoFinder output from all 47 species | |
| Msp_g31758 | PUB8, B80 | E3 ubiquitin ligase *(PUB8) & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Nbi_g07136 | PUB13, ATPUB13 | E3 ubiquitin ligase & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Ore_g05165 | ATPUB17, PUB17 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ore_g20708 | ATPUB17, PUB17 | E3 ubiquitin ligase & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Pir_g38766 | No alias | E3 ubiquitin ligase & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Pnu_g17953 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ppi_g01237 | ATPUB17, PUB17 | E3 ubiquitin ligase & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Ppi_g06418 | PUB13, ATPUB13 | E3 ubiquitin ligase & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0007.g003607 | ATPUB17, PUB17 | not classified & original description: CDS=1-2595 | 0.03 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0011.g005097 | No alias | not classified & original description: CDS=1-2154 | 0.04 | OrthoFinder output from all 47 species | |
| Smo181353 | PUB13, ATPUB13 | Protein degradation.peptide tagging.Ubiquitin... | 0.03 | OrthoFinder output from all 47 species | |
| Smo415326 | ATPUB17, PUB17 | U-box domain-containing protein 1 OS=Medicago truncatula | 0.03 | OrthoFinder output from all 47 species | |
| Solyc02g072080.1.1 | ATPUB17, PUB17,... | U-box domain-containing protein 17 OS=Arabidopsis... | 0.05 | OrthoFinder output from all 47 species | |
| Solyc03g114160.1.1 | Solyc03g114160 | E3 ubiquitin ligase (PUB) | 0.06 | OrthoFinder output from all 47 species | |
| Solyc05g005670.1.1 | Solyc05g005670 | E3 ubiquitin ligase (PUB) | 0.03 | OrthoFinder output from all 47 species | |
| Solyc05g008230.3.1 | Solyc05g008230 | E3 ubiquitin ligase (PUB) | 0.03 | OrthoFinder output from all 47 species | |
| Solyc06g076040.3.1 | PUB13, ATPUB13,... | E3 ubiquitin ligase (PUB) | 0.03 | OrthoFinder output from all 47 species | |
| Solyc09g056450.4.1 | PUB9, ATPUB9,... | U-box domain-containing protein 9 OS=Arabidopsis... | 0.03 | OrthoFinder output from all 47 species | |
| Solyc11g008390.2.1 | PUB14, ATPUB14,... | E3 ubiquitin ligase (PUB) | 0.03 | OrthoFinder output from all 47 species | |
| Solyc12g088360.2.1 | Solyc12g088360 | U-box domain-containing protein 4 OS=Arabidopsis... | 0.05 | OrthoFinder output from all 47 species | |
| Spa_g05552 | ATPUB17, PUB17 | E3 ubiquitin ligase & original description: none | 0.07 | OrthoFinder output from all 47 species | |
| Spa_g08558 | ATPUB17, PUB17 | not classified & original description: none | 0.1 | OrthoFinder output from all 47 species | |
| Spa_g11468 | PUB14, ATPUB14 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Spa_g25117 | PUB14, ATPUB14 | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Spa_g48656 | PUB14, ATPUB14 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Spa_g48731 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Tin_g02458 | No alias | not classified & original description: none | 0.07 | OrthoFinder output from all 47 species | |
| Tin_g10003 | No alias | not classified & original description: none | 0.06 | OrthoFinder output from all 47 species | |
| Zm00001e003398_P001 | PUB15, Zm00001e003398 | U-box domain-containing protein 15 OS=Arabidopsis... | 0.02 | OrthoFinder output from all 47 species | |
| Zm00001e014566_P002 | PUB9, ATPUB9,... | E3 ubiquitin ligase (PUB) | 0.04 | OrthoFinder output from all 47 species | |
| Zm00001e018578_P001 | Zm00001e018578 | no hits & (original description: none) | 0.03 | OrthoFinder output from all 47 species | |
| Zm00001e019429_P001 | Zm00001e019429 | U-box domain-containing protein 16 OS=Arabidopsis... | 0.05 | OrthoFinder output from all 47 species | |
| Zm00001e028839_P001 | Zm00001e028839 | U-box domain-containing protein 16 OS=Arabidopsis... | 0.03 | OrthoFinder output from all 47 species | |
| Zm00001e031915_P001 | Zm00001e031915 | U-box domain-containing protein 16 OS=Arabidopsis... | 0.04 | OrthoFinder output from all 47 species | |
| Zm00001e034012_P001 | Zm00001e034012 | E3 ubiquitin ligase (PUB) | 0.03 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0004842 | ubiquitin-protein transferase activity | IEA | Interproscan |
| MF | GO:0005515 | protein binding | IEA | Interproscan |
| BP | GO:0016567 | protein ubiquitination | IEA | Interproscan |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No Predicted GO terms available for this sequence |
| No external refs found! |
