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  5. Aspi01Gene65977.t1

Aspi01Gene65977.t1 (Aspi01Gene65977)


Aliases : Aspi01Gene65977

Description : component *(eS4) of small ribosomal-subunit (SSU) proteome & original description: none


Gene families : OG0002077 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002077_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Aspi01Gene65977.t1
Cluster HCCA: Cluster_120

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00041p00058440 evm_27.TU.AmTr_v1... Protein biosynthesis.cytosolic ribosome.small subunit... 0.02 OrthoFinder output from all 47 species
AT2G17360 No alias Ribosomal protein S4 (RPS4A) family protein 0.03 OrthoFinder output from all 47 species
AT5G58420 No alias Ribosomal protein S4 (RPS4A) family protein 0.03 OrthoFinder output from all 47 species
Azfi_s0091.g042854 No alias component *(eS4) of small ribosomal-subunit (SSU)... 0.04 OrthoFinder output from all 47 species
Cpa|evm.model.tig00021433.38 No alias 40S ribosomal protein S4 OS=Oryza sativa subsp. japonica 0.02 OrthoFinder output from all 47 species
Cre06.g308250 No alias Protein biosynthesis.cytosolic ribosome.small subunit... 0.01 OrthoFinder output from all 47 species
Len_g50156 No alias component *(eS4) of small ribosomal-subunit (SSU)... 0.04 OrthoFinder output from all 47 species
Mp8g03280.1 No alias component RPS4 of SSU proteome 0.03 OrthoFinder output from all 47 species
Mp8g03290.1 No alias component RPS4 of SSU proteome 0.02 OrthoFinder output from all 47 species
Ppi_g06230 No alias component *(eS4) of small ribosomal-subunit (SSU)... 0.03 OrthoFinder output from all 47 species
Sam_g27350 No alias component *(eS4) of small ribosomal-subunit (SSU)... 0.02 OrthoFinder output from all 47 species
Solyc02g070330.4.1 Solyc02g070330 component RPS4 of SSU proteome 0.03 OrthoFinder output from all 47 species
Zm00001e006307_P001 Zm00001e006307 component RPS4 of SSU proteome 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR002942 S4_RNA-bd 44 90
IPR032277 40S_S4_C 177 219
IPR013845 Ribosomal_S4e_central_region 95 169
IPR013843 Ribosomal_S4e_N 3 39
No external refs found!