Aspi01Gene66052.t1 (Aspi01Gene66052)


Aliases : Aspi01Gene66052

Description : ssDNA-binding protein *(OSB) & original description: none


Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Aspi01Gene66052.t1

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00010p00246970 evm_27.TU.AmTr_v1... Pentatricopeptide repeat-containing protein At4g39530... 0.04 OrthoFinder output from all 47 species
AMTR_s00019p00080380 evm_27.TU.AmTr_v1... Pentatricopeptide repeat-containing protein At1g59720,... 0.03 OrthoFinder output from all 47 species
AT1G31430 No alias Pentatricopeptide repeat (PPR-like) superfamily protein 0.02 OrthoFinder output from all 47 species
AT1G47720 OSB1 Primosome PriB/single-strand DNA-binding 0.03 OrthoFinder output from all 47 species
AT1G74400 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.04 OrthoFinder output from all 47 species
AT3G20730 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.04 OrthoFinder output from all 47 species
AT3G47840 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.03 OrthoFinder output from all 47 species
AT3G61170 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.08 OrthoFinder output from all 47 species
AT4G01030 No alias pentatricopeptide (PPR) repeat-containing protein 0.02 OrthoFinder output from all 47 species
AT4G25270 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.04 OrthoFinder output from all 47 species
Adi_g019854 LPA66 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aev_g07273 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Ala_g04857 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ala_g16773 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g25466 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ala_g33998 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ala_g36544 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g27208 No alias ssDNA-binding protein *(OSB) & original description: none 0.05 OrthoFinder output from all 47 species
Als_g30850 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aob_g20395 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aob_g27260 VAC1, ECB2, ATECB2 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g27890 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aob_g32957 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene07836.t1 REME1, Aspi01Gene07836 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene66769.t1 CRR22, Aspi01Gene66769 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene67429.t2 Aspi01Gene67429 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Azfi_s0007.g010932 REME1 not classified & original description: CDS=1-1479 0.03 OrthoFinder output from all 47 species
Azfi_s0049.g030697 No alias not classified & original description: CDS=1-2361 0.06 OrthoFinder output from all 47 species
Azfi_s0093.g043166 No alias not classified & original description: CDS=1-1980 0.04 OrthoFinder output from all 47 species
Azfi_s0485.g073410 No alias not classified & original description: CDS=1-1641 0.06 OrthoFinder output from all 47 species
Azfi_s1721.g106134 CRR22 not classified & original description: CDS=1-1431 0.05 OrthoFinder output from all 47 species
Cba_g05269 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g34428 CRR2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.06G014300.1 Ceric.06G014300 not classified & original description: pacid=50620883... 0.05 OrthoFinder output from all 47 species
Ceric.09G069300.1 OTP86, Ceric.09G069300 not classified & original description: pacid=50588354... 0.04 OrthoFinder output from all 47 species
Ceric.13G052000.1 Ceric.13G052000 not classified & original description: pacid=50635571... 0.04 OrthoFinder output from all 47 species
Ceric.1Z148400.1 Ceric.1Z148400 not classified & original description: pacid=50637111... 0.04 OrthoFinder output from all 47 species
Dac_g10056 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g26939 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g30474 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dac_g35459 OTP86 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g35673 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g08493 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dcu_g30253 No alias ssDNA-binding protein *(OSB) & original description: none 0.06 OrthoFinder output from all 47 species
Dcu_g38523 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Dcu_g48025 MEF21 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dde_g22315 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g36877 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g15835 CRR2 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g17074 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g19509 OTP82 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g24725 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Gb_01592 No alias Pentatricopeptide repeat-containing protein At4g14050,... 0.06 OrthoFinder output from all 47 species
LOC_Os01g51790.1 LOC_Os01g51790 Putative pentatricopeptide repeat-containing protein... 0.06 OrthoFinder output from all 47 species
LOC_Os03g13830.1 LOC_Os03g13830 Putative pentatricopeptide repeat-containing protein... 0.04 OrthoFinder output from all 47 species
LOC_Os03g52475.1 LOC_Os03g52475 Pentatricopeptide repeat-containing protein At3g28660... 0.03 OrthoFinder output from all 47 species
LOC_Os04g58980.1 LOC_Os04g58980 Putative pentatricopeptide repeat-containing protein... 0.04 OrthoFinder output from all 47 species
LOC_Os06g39650.1 LOC_Os06g39650 Pentatricopeptide repeat-containing protein At1g31430... 0.03 OrthoFinder output from all 47 species
LOC_Os09g24640.1 REME1, LOC_Os09g24640 Pentatricopeptide repeat-containing protein At2g36730... 0.04 OrthoFinder output from all 47 species
Len_g03339 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g08191 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g18069 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Len_g18308 OTP84 ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Len_g47776 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g54646 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g06676 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Lfl_g40188 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g22641 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g31739 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Msp_g33650 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g06656 OTP84 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g15565 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g15698 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Nbi_g41060 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g03998 No alias ssDNA-binding protein *(OSB) & original description: none 0.05 OrthoFinder output from all 47 species
Ore_g08807 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g09944 MEF22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g12671 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g20095 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g20377 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g33886 CRR22 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Pir_g16520 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g37149 OSB1 ssDNA-binding protein *(OSB) & original description: none 0.05 OrthoFinder output from all 47 species
Pir_g64763 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g03722 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pnu_g25239 OTP84 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g55749 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0003.g002023 No alias not classified & original description: CDS=1-2592 0.05 OrthoFinder output from all 47 species
Sacu_v1.1_s0006.g003098 No alias not classified & original description: CDS=1-2883 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0015.g006578 No alias not classified & original description: CDS=156-2555 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0042.g012770 No alias not classified & original description: CDS=1-1605 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0101.g019756 No alias not classified & original description: CDS=1-2544 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0147.g023182 No alias not classified & original description: CDS=1-4812 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s1579.g028098 No alias not classified & original description: CDS=1-249 0.04 OrthoFinder output from all 47 species
Smo130453 No alias Pentatricopeptide repeat-containing protein At4g13650... 0.03 OrthoFinder output from all 47 species
Spa_g24963 REME1 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g55549 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Tin_g04733 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g12273 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g20109 OTP84 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Tin_g23468 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Zm00001e013166_P001 Zm00001e013166 Pentatricopeptide repeat-containing protein At4g14820... 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 311 358
IPR046849 Eplus_motif 496 519
IPR046848 E_motif 429 491
IPR002885 Pentatricopeptide_repeat 286 307
IPR002885 Pentatricopeptide_repeat 386 410
No external refs found!