Aspi01Gene66769.t1 (CRR22, Aspi01Gene66769)


Aliases : CRR22, Aspi01Gene66769

Description : not classified & original description: none


Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Aspi01Gene66769.t1

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00057p00137550 evm_27.TU.AmTr_v1... Pentatricopeptide repeat-containing protein At2g36980,... 0.03 OrthoFinder output from all 47 species
Adi_g034179 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g036802 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g049577 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g057083 EMB2758 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g083164 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g104368 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g104520 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g109057 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g14052 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g14340 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g23642 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ala_g38174 No alias ssDNA-binding protein *(OSB) & original description: none 0.02 OrthoFinder output from all 47 species
Als_g03230 CRR22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g05139 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g18037 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g18512 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Als_g23879 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g29166 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g30202 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g30788 CRR22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g32098 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g55125 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g55222 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aob_g06025 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g02659 No alias ssDNA-binding protein *(OSB) & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene66052.t1 Aspi01Gene66052 ssDNA-binding protein *(OSB) & original description: none 0.04 OrthoFinder output from all 47 species
Azfi_s0002.g001303 No alias not classified & original description: CDS=1-2292 0.03 OrthoFinder output from all 47 species
Azfi_s0021.g015711 No alias not classified & original description: CDS=1-3111 0.03 OrthoFinder output from all 47 species
Azfi_s0033.g025102 No alias not classified & original description: CDS=1-3510 0.03 OrthoFinder output from all 47 species
Azfi_s0076.g037861 No alias not classified & original description: CDS=1-1125 0.03 OrthoFinder output from all 47 species
Azfi_s0099.g044025 No alias not classified & original description: CDS=1-2481 0.03 OrthoFinder output from all 47 species
Azfi_s0191.g056992 No alias not classified & original description: CDS=1-2262 0.03 OrthoFinder output from all 47 species
Azfi_s0277.g061496 No alias not classified & original description: CDS=1-2121 0.03 OrthoFinder output from all 47 species
Azfi_s0551.g076599 No alias not classified & original description: CDS=1-1686 0.03 OrthoFinder output from all 47 species
Azfi_s0808.g087728 CRR22 not classified & original description: CDS=1-2094 0.03 OrthoFinder output from all 47 species
Azfi_s0889.g091250 No alias not classified & original description: CDS=1-2652 0.03 OrthoFinder output from all 47 species
Ceric.07G044100.1 RARE1, Ceric.07G044100 not classified & original description: pacid=50626680... 0.03 OrthoFinder output from all 47 species
Ceric.09G007000.1 Ceric.09G007000 not classified & original description: pacid=50586983... 0.02 OrthoFinder output from all 47 species
Ceric.19G064200.1 MEF19, Ceric.19G064200 not classified & original description: pacid=50576611... 0.03 OrthoFinder output from all 47 species
Ceric.24G054500.1 OTP86, Ceric.24G054500 not classified & original description: pacid=50628633... 0.04 OrthoFinder output from all 47 species
Dac_g15087 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g19456 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g04950 EMB2758 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g17074 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g26697 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01023345001 No alias Pentatricopeptide repeat-containing protein At4g33990... 0.02 OrthoFinder output from all 47 species
Gb_25046 No alias Putative pentatricopeptide repeat-containing protein... 0.03 OrthoFinder output from all 47 species
LOC_Os03g52475.1 LOC_Os03g52475 Pentatricopeptide repeat-containing protein At3g28660... 0.03 OrthoFinder output from all 47 species
Len_g16432 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g19028 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g56586 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g03305 No alias ssDNA-binding protein *(OSB) & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g07068 CRR22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g14903 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g15171 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g33055 DOT4 not classified & original description: none 0.03 OrthoFinder output from all 47 species
MA_10434740g0010 OSB1 ssDNA-binding protein (OSB) 0.03 OrthoFinder output from all 47 species
MA_50789g0010 No alias Pentatricopeptide repeat-containing protein At2g13600... 0.02 OrthoFinder output from all 47 species
Msp_g02471 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g15698 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g38571 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g43122 OTP82 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g01026 No alias ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g63870 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g22818 CRR2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g05872 EMB2758 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g30421 VAC1, ECB2, ATECB2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g53944 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g59328 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0006.g003098 No alias not classified & original description: CDS=1-2883 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0170.g024361 OTP84 cyclin-dependent kinase inhibitor *(KRP/ICK) & original... 0.03 OrthoFinder output from all 47 species
Sam_g13791 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g50566 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Smo16626 No alias Pentatricopeptide repeat-containing protein At4g16835,... 0.02 OrthoFinder output from all 47 species
Smo26993 CRR22 Pentatricopeptide repeat-containing protein At1g11290,... 0.02 OrthoFinder output from all 47 species
Smo34484 No alias Pentatricopeptide repeat-containing protein At3g46790,... 0.02 OrthoFinder output from all 47 species
Spa_g05402 CRR2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g23504 EMB2758 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g50449 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g51341 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Tin_g04707 OTP84 ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g05657 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g06116 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g26455 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g35082 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Zm00001e013166_P001 Zm00001e013166 Pentatricopeptide repeat-containing protein At4g14820... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 589 637
IPR002885 Pentatricopeptide_repeat 286 334
IPR002885 Pentatricopeptide_repeat 151 199
IPR002885 Pentatricopeptide_repeat 388 435
IPR002885 Pentatricopeptide_repeat 489 537
IPR002885 Pentatricopeptide_repeat 95 115
IPR002885 Pentatricopeptide_repeat 463 488
IPR002885 Pentatricopeptide_repeat 261 283
No external refs found!