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  5. Aspi01Gene66973.t1

Aspi01Gene66973.t1 (ATEXPA10, AT-EXP10,...)


Aliases : ATEXPA10, AT-EXP10, ATEXP10, EXPA10, EXP10, ATHEXP ALPHA 1.1, Aspi01Gene66973

Description : alpha-class expansin & original description: none


Gene families : OG0000032 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Aspi01Gene66973.t1

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00001p00115760 ATEXP7, EXPA7,... Cell wall.cell wall proteins.expansins.alpha-type expansin 0.03 OrthoFinder output from all 47 species
Aspi01Gene00387.t1 ATEXPA10,... alpha-class expansin & original description: none 0.07 OrthoFinder output from all 47 species
Aspi01Gene00428.t1 EXP15, ATEXPA15,... alpha-class expansin & original description: none 0.07 OrthoFinder output from all 47 species
Aspi01Gene00429.t1 EXP15, ATEXPA15,... alpha-class expansin & original description: none 0.07 OrthoFinder output from all 47 species
Aspi01Gene00505.t1 ATEXPA10,... alpha-class expansin & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene14343.t1 ATEXPA4, ATEXP4,... alpha-class expansin & original description: none 0.06 OrthoFinder output from all 47 species
Aspi01Gene29952.t1 EXPA16, ATHEXP... alpha-class expansin & original description: none 0.07 OrthoFinder output from all 47 species
Aspi01Gene38493.t1 ATEXPA10,... alpha-class expansin & original description: none 0.06 OrthoFinder output from all 47 species
Aspi01Gene45675.t1 ATEXPA10,... alpha-class expansin & original description: none 0.07 OrthoFinder output from all 47 species
Aspi01Gene58001.t1 EXPA8, ATHEXP... not classified & original description: none 0.06 OrthoFinder output from all 47 species
Aspi01Gene66971.t1 ATEXPA10,... alpha-class expansin & original description: none 0.05 OrthoFinder output from all 47 species
Aspi01Gene66977.t1 ATEXPA10,... alpha-class expansin & original description: none 0.06 OrthoFinder output from all 47 species
Azfi_s0959.g093909 No alias not classified & original description: CDS=1-708 0.04 OrthoFinder output from all 47 species
Ehy_g26486 ATEXPA4, ATEXP4,... alpha-class expansin & original description: none 0.05 OrthoFinder output from all 47 species
GSVIVT01030191001 No alias Expansin-A8 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
Nbi_g07225 ATEXPA3, EXP3,... alpha-class expansin & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g07848 ATEXPA10,... alpha-class expansin & original description: none 0.05 OrthoFinder output from all 47 species
Ore_g27709 EXP15, ATEXPA15,... alpha-class expansin & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g43367 ATEXPA3, EXP3,... alpha-class expansin & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g44001 ATEXPA1, EXP1,... alpha-class expansin & original description: none 0.04 OrthoFinder output from all 47 species
Pp3c7_12810V3.1 ATEXPA4, ATEXP4,... expansin A14 0.02 OrthoFinder output from all 47 species
Solyc01g090810.4.1 ATHEXP BETA 1.4,... Putative expansin-B2 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Solyc05g052330.3.1 ATHEXP BETA 1.1,... Expansin-B5 OS=Oryza sativa subsp. japonica... 0.02 OrthoFinder output from all 47 species
Solyc07g063210.3.1 ATHEXP ALPHA... alpha-class expansin 0.03 OrthoFinder output from all 47 species
Zm00001e014247_P001 ATHEXP ALPHA... Expansin-A23 OS=Oryza sativa subsp. japonica... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR007117 Expansin_CBD 208 285
IPR009009 RlpA-like_DPBB 109 197
No external refs found!