Aspi01Gene67481.t1 (emb1473, Aspi01Gene67481)

Aliases : emb1473, Aspi01Gene67481

Description : not classified & original description: none

Gene families : OG0006254 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0006254_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Aspi01Gene67481.t1

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00046p00228230	emb1473,...	Protein biosynthesis.organelle translation...	0.04	OrthoFinder output from all 47 species
AT1G78630	emb1473	Ribosomal protein L13 family protein	0.03	OrthoFinder output from all 47 species
Als_g17613	emb1473	component *(uL13c) of large plastid ribosomal-subunit...	0.03	OrthoFinder output from all 47 species
Cpa\|evm.model.tig00020912.24	emb1473	50S ribosomal protein L13, chloroplastic OS=Arabidopsis thaliana	0.02	OrthoFinder output from all 47 species
Cre06.g264350	emb1473	Protein biosynthesis.organelle translation...	0.02	OrthoFinder output from all 47 species
Dcu_g00726	emb1473	component *(uL13c) of large plastid ribosomal-subunit...	0.06	OrthoFinder output from all 47 species
GSVIVT01014101001	emb1473	Protein biosynthesis.organelle translation...	0.03	OrthoFinder output from all 47 species
LOC_Os01g54540.1	emb1473, LOC_Os01g54540	component psRPL13 of large ribosomal subunit proteome	0.03	OrthoFinder output from all 47 species
Len_g01005	emb1473	component *(uL13c) of large plastid ribosomal-subunit...	0.04	OrthoFinder output from all 47 species
Lfl_g03832	emb1473	component *(uL13c) of large plastid ribosomal-subunit...	0.04	OrthoFinder output from all 47 species
MA_27171g0010	No alias	no hits & (original description: none)	0.02	OrthoFinder output from all 47 species
Mp3g07030.1	emb1473	component psRPL13 of large ribosomal subunit proteome	0.02	OrthoFinder output from all 47 species
Pnu_g03358	emb1473	component *(uL13c) of large plastid ribosomal-subunit...	0.04	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003735	structural constituent of ribosome	IEA	Interproscan
MF	GO:0005198	structural molecule activity	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005840	ribosome	IEA	Interproscan
BP	GO:0006412	translation	IEA	Interproscan
BP	GO:0006518	peptide metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009058	biosynthetic process	None	Extended
BP	GO:0009059	macromolecule biosynthetic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0019538	protein metabolic process	None	Extended
BP	GO:0034641	cellular nitrogen compound metabolic process	None	Extended
BP	GO:0034645	cellular macromolecule biosynthetic process	None	Extended
BP	GO:0043043	peptide biosynthetic process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043228	non-membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043232	intracellular non-membrane-bounded organelle	None	Extended
BP	GO:0043603	amide metabolic process	None	Extended
BP	GO:0043604	amide biosynthetic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044249	cellular biosynthetic process	None	Extended
BP	GO:0044260	cellular macromolecule metabolic process	None	Extended
BP	GO:0044271	cellular nitrogen compound biosynthetic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended
BP	GO:1901566	organonitrogen compound biosynthetic process	None	Extended
BP	GO:1901576	organic substance biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR005822	Ribosomal_L13	2	48

External Links

No external refs found!

Aspi01Gene67481.t1 (emb1473, Aspi01Gene67481)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation