Aspi01Gene67539.t1 (XRN3, AtXRN3, Aspi01Gene67539)

Aliases : XRN3, AtXRN3, Aspi01Gene67539

Description : not classified & original description: none

Gene families : OG0000769 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000769_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Aspi01Gene67539.t1

Target	Alias	Description	ECC score	Gene Family Method
Adi_g069080	XRN3, AtXRN3	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Aob_g06747	XRN3, AtXRN3	exoribonuclease *(XRN4) & original description: none	0.02	OrthoFinder output from all 47 species
Aspi01Gene15159.t1	XRN3, AtXRN3,...	not classified & original description: none	0.05	OrthoFinder output from all 47 species
Cba_g23303	XRN3, AtXRN3	exoribonuclease *(RAT1/XRN2) & original description: none	0.04	OrthoFinder output from all 47 species
Cre16.g679900	XRN3, AtXRN3	5-3 exoribonuclease 3 OS=Arabidopsis thaliana	0.02	OrthoFinder output from all 47 species
Ehy_g06207	XRN3, AtXRN3	not classified & original description: none	0.03	OrthoFinder output from all 47 species
GSVIVT01021865001	EIN5, AIN1, XRN4, ATXRN4	RNA processing.RNA decay.deadenylation-dependent...	0.03	OrthoFinder output from all 47 species
LOC_Os03g58060.1	EIN5, AIN1,...	EBF-modulating exoribonuclease (EIN5/XRN4)....	0.02	OrthoFinder output from all 47 species
Lfl_g19229	EIN5, AIN1, XRN4, ATXRN4	exoribonuclease *(XRN4) & original description: none	0.03	OrthoFinder output from all 47 species
Ore_g19708	XRN3, AtXRN3	exoribonuclease *(RAT1/XRN2) & original description: none	0.03	OrthoFinder output from all 47 species
Zm00001e011879_P001	EIN5, AIN1,...	EBF-modulating exoribonuclease (EIN5/XRN4)....	0.03	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	IEA	Interproscan
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0004518	nuclease activity	None	Extended
MF	GO:0004527	exonuclease activity	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
MF	GO:0008270	zinc ion binding	IEA	Interproscan
MF	GO:0016787	hydrolase activity	None	Extended
MF	GO:0016788	hydrolase activity, acting on ester bonds	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043169	cation binding	None	Extended
MF	GO:0046872	metal ion binding	None	Extended
MF	GO:0046914	transition metal ion binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

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Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR004859	Xrn1_N	1	253
IPR001878	Znf_CCHC	263	279

External Links

No external refs found!