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  5. Aspi01Gene67878.t1

Aspi01Gene67878.t1 (MBD05, MBD5, ATMBD5,...)


Aliases : MBD05, MBD5, ATMBD5, Aspi01Gene67878

Description : methylation reader *(MBD5-6) & original description: none


Gene families : OG0000559 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000559_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Aspi01Gene67878.t1

Target Alias Description ECC score Gene Family Method Actions
AT3G46580 MBD05, MBD5, ATMBD5 methyl-CPG-binding domain protein 5 0.03 OrthoFinder output from all 47 species
Cba_g15382 MBD05, MBD5, ATMBD5 methylation reader *(MBD5-6) & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g04443 No alias methylation reader *(MBD5-6) & original description: none 0.03 OrthoFinder output from all 47 species
Len_g03883 No alias methylation reader *(MBD5-6) & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g03371 MBD05, MBD5, ATMBD5 methylation reader *(MBD5-6) & original description: none 0.03 OrthoFinder output from all 47 species
MA_10435096g0020 MBD13 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Ore_g10241 MBD05, MBD5, ATMBD5 methylation reader *(MBD5-6) & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g14486 ATMBD6, MBD6 methylation reader *(MBD5-6) & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g01187 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0006.g002943 MBD05, MBD5, ATMBD5 methylation reader *(MBD5-6) & original description: CDS=1-1323 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR001739 Methyl_CpG_DNA-bd 403 451
No external refs found!