Aliases : CRR22, Aspi01Gene68665
Description : not classified & original description: none
Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00010p00113430 | evm_27.TU.AmTr_v1... | Pentatricopeptide repeat-containing protein At1g18485... | 0.04 | OrthoFinder output from all 47 species | |
| AMTR_s00019p00240430 | OSB3,... | RNA biosynthesis.organelle machineries.RNA polymerase... | 0.03 | OrthoFinder output from all 47 species | |
| AMTR_s00049p00223290 | evm_27.TU.AmTr_v1... | Putative pentatricopeptide repeat-containing protein... | 0.02 | OrthoFinder output from all 47 species | |
| AMTR_s00063p00172440 | evm_27.TU.AmTr_v1... | Pentatricopeptide repeat-containing protein At4g13650... | 0.02 | OrthoFinder output from all 47 species | |
| AMTR_s00129p00082590 | evm_27.TU.AmTr_v1... | Pentatricopeptide repeat-containing protein At1g19720... | 0.03 | OrthoFinder output from all 47 species | |
| AT1G11290 | CRR22 | Pentatricopeptide repeat (PPR) superfamily protein | 0.03 | OrthoFinder output from all 47 species | |
| AT1G15510 | VAC1, ECB2, ATECB2 | Tetratricopeptide repeat (TPR)-like superfamily protein | 0.03 | OrthoFinder output from all 47 species | |
| AT2G01510 | No alias | Tetratricopeptide repeat (TPR)-like superfamily protein | 0.02 | OrthoFinder output from all 47 species | |
| AT3G16610 | No alias | pentatricopeptide (PPR) repeat-containing protein | 0.03 | OrthoFinder output from all 47 species | |
| AT5G03800 | emb1899, EMB175, EMB166 | Pentatricopeptide repeat (PPR) superfamily protein | 0.03 | OrthoFinder output from all 47 species | |
| Aev_g06320 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ala_g21469 | No alias | ssDNA-binding protein *(OSB) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Als_g03878 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Als_g06397 | OTP86 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Als_g07162 | No alias | not classified & original description: none | 0.01 | OrthoFinder output from all 47 species | |
| Als_g18499 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Als_g19046 | OTP86 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Als_g20651 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Als_g63296 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aob_g07366 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aob_g13877 | VAC1, ECB2, ATECB2 | not classified & original description: none | 0.01 | OrthoFinder output from all 47 species | |
| Aob_g24083 | No alias | not classified & original description: none | 0.01 | OrthoFinder output from all 47 species | |
| Aob_g28201 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aob_g32690 | OTP84 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aob_g37596 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Azfi_s0007.g010913 | VAC1, ECB2, ATECB2 | not classified & original description: CDS=1-1608 | 0.03 | OrthoFinder output from all 47 species | |
| Azfi_s0034.g025337 | DOT4 | not classified & original description: CDS=145-3054 | 0.03 | OrthoFinder output from all 47 species | |
| Azfi_s0038.g026305 | EMB2758 | not classified & original description: CDS=1-1827 | 0.03 | OrthoFinder output from all 47 species | |
| Azfi_s0068.g036252 | No alias | not classified & original description: CDS=1-1656 | 0.04 | OrthoFinder output from all 47 species | |
| Azfi_s0072.g037011 | No alias | not classified & original description: CDS=202-3270 | 0.04 | OrthoFinder output from all 47 species | |
| Azfi_s0117.g046569 | No alias | not classified & original description: CDS=1-2520 | 0.01 | OrthoFinder output from all 47 species | |
| Azfi_s0126.g048645 | No alias | not classified & original description: CDS=1-2262 | 0.03 | OrthoFinder output from all 47 species | |
| Azfi_s0129.g048869 | No alias | not classified & original description: CDS=1-2157 | 0.04 | OrthoFinder output from all 47 species | |
| Azfi_s0190.g056908 | No alias | not classified & original description: CDS=47-3490 | 0.03 | OrthoFinder output from all 47 species | |
| Azfi_s0257.g060586 | No alias | not classified & original description: CDS=1-3168 | 0.03 | OrthoFinder output from all 47 species | |
| Azfi_s0351.g066580 | No alias | not classified & original description: CDS=1-3804 | 0.03 | OrthoFinder output from all 47 species | |
| Azfi_s0731.g084096 | No alias | not classified & original description: CDS=1-3909 | 0.03 | OrthoFinder output from all 47 species | |
| Cba_g29994 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ceric.01G031300.1 | Ceric.01G031300 | not classified & original description: pacid=50591599... | 0.01 | OrthoFinder output from all 47 species | |
| Ceric.05G093000.1 | Ceric.05G093000 | not classified & original description: pacid=50577993... | 0.01 | OrthoFinder output from all 47 species | |
| Ceric.10G062000.1 | Ceric.10G062000 | ssDNA-binding protein *(OSB) & original description:... | 0.04 | OrthoFinder output from all 47 species | |
| Ceric.1Z131300.1 | CRR22, Ceric.1Z131300 | not classified & original description: pacid=50639026... | 0.03 | OrthoFinder output from all 47 species | |
| Ceric.33G050800.1 | CRR22, Ceric.33G050800 | not classified & original description: pacid=50606654... | 0.03 | OrthoFinder output from all 47 species | |
| Ceric.36G058400.1 | Ceric.36G058400 | not classified & original description: pacid=50568396... | 0.01 | OrthoFinder output from all 47 species | |
| Cpa|evm.model.tig00000851.30 | No alias | Pentatricopeptide repeat-containing protein At5g61990,... | 0.03 | OrthoFinder output from all 47 species | |
| Cpa|evm.model.tig00001130.28 | No alias | No description available | 0.01 | OrthoFinder output from all 47 species | |
| Dac_g18832 | No alias | ssDNA-binding protein *(OSB) & original description: none | 0.01 | OrthoFinder output from all 47 species | |
| Dac_g19126 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Dac_g30276 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dac_g31026 | OTP84 | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Dcu_g07839 | EMB2758 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dcu_g35769 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dcu_g36077 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dcu_g47810 | CRR22 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dde_g15388 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dde_g29241 | CRR22 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Dde_g47807 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ehy_g16282 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| GSVIVT01000719001 | OSB1 | Cell cycle.organelle machineries.DNA... | 0.04 | OrthoFinder output from all 47 species | |
| GSVIVT01008656001 | No alias | Pentatricopeptide repeat-containing protein At5g50990... | 0.03 | OrthoFinder output from all 47 species | |
| GSVIVT01023971001 | No alias | Pentatricopeptide repeat-containing protein At4g35130,... | 0.02 | OrthoFinder output from all 47 species | |
| GSVIVT01036142001 | No alias | Pentatricopeptide repeat-containing protein At5g66520... | 0.02 | OrthoFinder output from all 47 species | |
| GSVIVT01036207001 | OTP82 | Pentatricopeptide repeat-containing protein At5g66520... | 0.03 | OrthoFinder output from all 47 species | |
| Gb_12832 | No alias | Pentatricopeptide repeat-containing protein At2g13600... | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os02g50280.1 | CRR22, LOC_Os02g50280 | Pentatricopeptide repeat-containing protein At1g11290,... | 0.02 | OrthoFinder output from all 47 species | |
| LOC_Os03g44210.2 | LOC_Os03g44210 | RNA editing factor (SEL1/PDM1) | 0.02 | OrthoFinder output from all 47 species | |
| LOC_Os04g02850.1 | OTP84, LOC_Os04g02850 | RNA editing factor (OTP84) | 0.02 | OrthoFinder output from all 47 species | |
| LOC_Os04g51350.1 | LOC_Os04g51350 | RNA editing factor (AEF1) | 0.02 | OrthoFinder output from all 47 species | |
| LOC_Os05g49920.1 | VAC1, ECB2,... | RNA editing factor (ECB2/VAC1) | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os05g50950.1 | LOC_Os05g50950 | Pentatricopeptide repeat-containing protein At4g01030,... | 0.02 | OrthoFinder output from all 47 species | |
| LOC_Os07g02280.1 | LOC_Os07g02280 | RNA editing factor (OTP80) | 0.02 | OrthoFinder output from all 47 species | |
| LOC_Os07g39910.1 | LOC_Os07g39910 | Pentatricopeptide repeat-containing protein At1g25360... | 0.02 | OrthoFinder output from all 47 species | |
| LOC_Os12g36620.1 | LOC_Os12g36620 | Pentatricopeptide repeat-containing protein At4g13650... | 0.01 | OrthoFinder output from all 47 species | |
| Len_g24715 | OTP86 | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Lfl_g04374 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Lfl_g06850 | No alias | not classified & original description: none | 0.01 | OrthoFinder output from all 47 species | |
| Lfl_g26678 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Nbi_g06230 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Nbi_g07674 | CRR22 | not classified & original description: none | 0.01 | OrthoFinder output from all 47 species | |
| Nbi_g25474 | No alias | not classified & original description: none | 0.01 | OrthoFinder output from all 47 species | |
| Nbi_g27459 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Ore_g07300 | CRR22 | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Ore_g16142 | No alias | ssDNA-binding protein *(OSB) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ore_g40050 | OSB1 | ssDNA-binding protein *(OSB) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Pnu_g30636 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ppi_g07521 | OTP86 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ppi_g22095 | CRR22 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ppi_g22239 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ppi_g32073 | VAC1, ECB2, ATECB2 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ppi_g53376 | No alias | ssDNA-binding protein *(OSB) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ppi_g53979 | CRR22 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ppi_g56302 | EMB2261 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ppi_g59333 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0044.g013068 | No alias | not classified & original description: CDS=1-1464 | 0.03 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0080.g017968 | No alias | not classified & original description: CDS=1-2673 | 0.02 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0096.g019336 | No alias | not classified & original description: CDS=1-1245 | 0.03 | OrthoFinder output from all 47 species | |
| Sam_g03180 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Sam_g03385 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Sam_g11237 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Sam_g12389 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Sam_g14540 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Sam_g14564 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Sam_g16013 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Sam_g17245 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Sam_g19460 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Sam_g24307 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Sam_g24796 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Sam_g25244 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Sam_g28894 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Sam_g37186 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Sam_g39953 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Sam_g51766 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Smo90123 | OTP84 | Pentatricopeptide repeat-containing protein At3g22690... | 0.02 | OrthoFinder output from all 47 species | |
| Smo98955 | CRR22 | Pentatricopeptide repeat-containing protein At2g13600... | 0.03 | OrthoFinder output from all 47 species | |
| Solyc01g007850.2.1 | Solyc01g007850 | Pentatricopeptide repeat-containing protein At4g13650... | 0.02 | OrthoFinder output from all 47 species | |
| Solyc02g079260.2.1 | Solyc02g079260 | Pentatricopeptide repeat-containing protein At4g13650... | 0.02 | OrthoFinder output from all 47 species | |
| Spa_g07598 | OTP84 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Spa_g15000 | OTP84 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Spa_g56457 | OTP84 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Tin_g04130 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Tin_g04368 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Tin_g09800 | No alias | not classified & original description: none | 0.01 | OrthoFinder output from all 47 species | |
| Tin_g18799 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Tin_g27046 | No alias | not classified & original description: none | 0.01 | OrthoFinder output from all 47 species | |
| Tin_g28890 | VAC1, ECB2, ATECB2 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Tin_g46045 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Zm00001e002552_P001 | Zm00001e002552 | RNA editing factor (SEL1/PDM1) | 0.02 | OrthoFinder output from all 47 species | |
| Zm00001e012422_P001 | OSB1, Zm00001e012422 | ssDNA-binding protein (OSB) | 0.02 | OrthoFinder output from all 47 species | |
| Zm00001e015440_P001 | CRR22, Zm00001e015440 | Pentatricopeptide repeat-containing protein At3g57430,... | 0.01 | OrthoFinder output from all 47 species | |
| Zm00001e016923_P001 | CRR2, Zm00001e016923 | Pentatricopeptide repeat-containing protein At3g46790,... | 0.02 | OrthoFinder output from all 47 species | |
| Zm00001e020442_P001 | Zm00001e020442 | Pentatricopeptide repeat-containing protein At4g21300... | 0.03 | OrthoFinder output from all 47 species | |
| Zm00001e021457_P001 | CRR22, Zm00001e021457 | Pentatricopeptide repeat-containing protein At1g11290,... | 0.02 | OrthoFinder output from all 47 species | |
| Zm00001e029186_P001 | Zm00001e029186 | Pentatricopeptide repeat-containing protein At1g19720... | 0.03 | OrthoFinder output from all 47 species | |
| Zm00001e031351_P001 | EMB2261, Zm00001e031351 | RNA editing factor (ECD1) | 0.02 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0008270 | zinc ion binding | IEA | Interproscan |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No Predicted GO terms available for this sequence |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR002885 | Pentatricopeptide_repeat | 455 | 502 |
| IPR002885 | Pentatricopeptide_repeat | 354 | 402 |
| IPR002885 | Pentatricopeptide_repeat | 153 | 201 |
| IPR002885 | Pentatricopeptide_repeat | 253 | 301 |
| IPR002885 | Pentatricopeptide_repeat | 556 | 603 |
| IPR032867 | DYW_dom | 770 | 862 |
| IPR046848 | E_motif | 672 | 734 |
| IPR002885 | Pentatricopeptide_repeat | 428 | 454 |
| IPR002885 | Pentatricopeptide_repeat | 127 | 152 |
| IPR002885 | Pentatricopeptide_repeat | 629 | 653 |
| No external refs found! |
