1. Home
  2. Species
  3. Alsophila spinulosa
  4. Sequence
  5. Aspi01Gene69642.t1

Aspi01Gene69642.t1 (GH9B14, AtGH9B14,...)


Aliases : GH9B14, AtGH9B14, Aspi01Gene69642

Description : not classified & original description: none


Gene families : OG0000240 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000240_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Aspi01Gene69642.t1

Target Alias Description ECC score Gene Family Method Actions
AT1G02800 ATCEL2, CEL2 cellulase 2 0.02 OrthoFinder output from all 47 species
AT1G19940 AtGH9B5, GH9B5 glycosyl hydrolase 9B5 0.03 OrthoFinder output from all 47 species
AT1G22880 CEL5, ATGH9B4, ATCEL5 cellulase 5 0.04 OrthoFinder output from all 47 species
AT1G64390 GH9C2, AtGH9C2 glycosyl hydrolase 9C2 0.04 OrthoFinder output from all 47 species
AT2G32990 AtGH9B8, GH9B8 glycosyl hydrolase 9B8 0.03 OrthoFinder output from all 47 species
AT4G23560 GH9B15, AtGH9B15 glycosyl hydrolase 9B15 0.03 OrthoFinder output from all 47 species
Als_g00949 AtGH9B5, GH9B5 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ceric.15G067100.1 AtGH9A4, GH9A4,... not classified & original description: pacid=50640833... 0.02 OrthoFinder output from all 47 species
GSVIVT01028042001 AtGH9B13, GH9B13 Endoglucanase 17 OS=Arabidopsis thaliana 0.05 OrthoFinder output from all 47 species
LOC_Os06g14540.1 CEL1, GH9B1,... Endoglucanase 17 OS=Oryza sativa subsp. japonica... 0.03 OrthoFinder output from all 47 species
MA_42717g0010 AtGH9C3, GH9C3 Endoglucanase 19 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
MA_74652g0010 CEL1, GH9B1, ATGH9B1 Endoglucanase 8 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Nbi_g28791 AtGH9C3, GH9C3 class-C endo-1,4-beta-glucanase & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g09855 AtGH9C3, GH9C3 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pp3c19_18640V3.1 AtGH9B13,... glycosyl hydrolase 9B8 0.01 OrthoFinder output from all 47 species
Ppi_g62195 GH9C2, AtGH9C2 class-C endo-1,4-beta-glucanase & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g63529 GH9C2, AtGH9C2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g40050 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Solyc09g075360.4.1 AtGH9B13,... Endoglucanase 17 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Zm00001e013509_P001 ATCEL2, CEL2,... Endoglucanase 4 OS=Oryza sativa subsp. japonica... 0.02 OrthoFinder output from all 47 species
Zm00001e026066_P002 AtGH9C3, GH9C3,... Endoglucanase 2 OS=Oryza sativa subsp. japonica... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEA Interproscan
BP GO:0005975 carbohydrate metabolic process IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR001701 Glyco_hydro_9 31 488
No external refs found!