Aliases : Aspi01Gene70770
Description : not classified & original description: none
Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Aspi01Gene70770.t1 | |
| Cluster | HCCA: Cluster_25 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00057p00151990 | evm_27.TU.AmTr_v1... | Pentatricopeptide repeat-containing protein At4g13650... | 0.04 | OrthoFinder output from all 47 species | |
| AMTR_s00587p00011650 | evm_27.TU.AmTr_v1... | Putative pentatricopeptide repeat-containing protein... | 0.01 | OrthoFinder output from all 47 species | |
| Adi_g004476 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Adi_g104656 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aev_g07273 | No alias | not classified & original description: none | 0.01 | OrthoFinder output from all 47 species | |
| Ala_g14532 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ala_g21860 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Als_g05667 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Als_g56368 | CRR22 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Als_g58410 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aob_g09402 | No alias | not classified & original description: none | 0.01 | OrthoFinder output from all 47 species | |
| Azfi_s0001.g000844 | No alias | not classified & original description: CDS=1-1557 | 0.04 | OrthoFinder output from all 47 species | |
| Azfi_s0004.g008393 | CRR22 | not classified & original description: CDS=1-1839 | 0.03 | OrthoFinder output from all 47 species | |
| Azfi_s0011.g012689 | No alias | not classified & original description: CDS=1-2352 | 0.03 | OrthoFinder output from all 47 species | |
| Azfi_s0045.g030112 | No alias | not classified & original description: CDS=94-318 | 0.01 | OrthoFinder output from all 47 species | |
| Azfi_s0049.g030697 | No alias | not classified & original description: CDS=1-2361 | 0.01 | OrthoFinder output from all 47 species | |
| Azfi_s0065.g035815 | No alias | not classified & original description: CDS=1-2163 | 0.01 | OrthoFinder output from all 47 species | |
| Azfi_s0069.g036583 | No alias | not classified & original description: CDS=1-1518 | 0.03 | OrthoFinder output from all 47 species | |
| Azfi_s0115.g046284 | No alias | not classified & original description: CDS=76-2679 | 0.03 | OrthoFinder output from all 47 species | |
| Azfi_s0128.g048776 | No alias | not classified & original description: CDS=1-1662 | 0.03 | OrthoFinder output from all 47 species | |
| Azfi_s0195.g057240 | No alias | not classified & original description: CDS=1-2328 | 0.03 | OrthoFinder output from all 47 species | |
| Azfi_s0251.g060280 | No alias | not classified & original description: CDS=1-3180 | 0.03 | OrthoFinder output from all 47 species | |
| Azfi_s0270.g061187 | No alias | not classified & original description: CDS=1-3441 | 0.01 | OrthoFinder output from all 47 species | |
| Azfi_s0529.g075791 | No alias | protein involved in PS-I assembly *(PYG7) & original... | 0.03 | OrthoFinder output from all 47 species | |
| Azfi_s1721.g106134 | CRR22 | not classified & original description: CDS=1-1431 | 0.03 | OrthoFinder output from all 47 species | |
| Cba_g13534 | CRR22 | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Ceric.06G062800.1 | Ceric.06G062800 | not classified & original description: pacid=50620833... | 0.04 | OrthoFinder output from all 47 species | |
| Dac_g18832 | No alias | ssDNA-binding protein *(OSB) & original description: none | 0.01 | OrthoFinder output from all 47 species | |
| Dcu_g07128 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dcu_g38857 | No alias | ssDNA-binding protein *(OSB) & original description: none | 0.01 | OrthoFinder output from all 47 species | |
| Dcu_g40681 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dde_g15506 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dde_g21521 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Dde_g22631 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dde_g22634 | No alias | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Dde_g24220 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dde_g36360 | No alias | ssDNA-binding protein *(OSB) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dde_g46329 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dde_g46553 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ehy_g10023 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ehy_g14557 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ehy_g19509 | OTP82 | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| GSVIVT01008656001 | No alias | Pentatricopeptide repeat-containing protein At5g50990... | 0.03 | OrthoFinder output from all 47 species | |
| GSVIVT01008721001 | No alias | Pentatricopeptide repeat-containing protein At5g40410,... | 0.01 | OrthoFinder output from all 47 species | |
| GSVIVT01009227001 | CRR22 | Pentatricopeptide repeat-containing protein At2g22070... | 0.03 | OrthoFinder output from all 47 species | |
| GSVIVT01023818001 | CRR28 | Pentatricopeptide repeat-containing protein At4g21065... | 0.01 | OrthoFinder output from all 47 species | |
| GSVIVT01037944001 | No alias | Pentatricopeptide repeat-containing protein At1g50270... | 0.01 | OrthoFinder output from all 47 species | |
| LOC_Os01g10800.1 | DOT4, LOC_Os01g10800 | Pentatricopeptide repeat-containing protein DOT4,... | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os02g46980.1 | LOC_Os02g46980 | Pentatricopeptide repeat-containing protein At1g31920... | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os02g50280.1 | CRR22, LOC_Os02g50280 | Pentatricopeptide repeat-containing protein At1g11290,... | 0.02 | OrthoFinder output from all 47 species | |
| LOC_Os03g04390.1 | LOC_Os03g04390 | Pentatricopeptide repeat-containing protein At4g35130,... | 0.02 | OrthoFinder output from all 47 species | |
| LOC_Os03g58100.1 | OTP85, LOC_Os03g58100 | RNA editing factor (OTP85) | 0.01 | OrthoFinder output from all 47 species | |
| LOC_Os12g36620.1 | LOC_Os12g36620 | Pentatricopeptide repeat-containing protein At4g13650... | 0.01 | OrthoFinder output from all 47 species | |
| Len_g04722 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Len_g32688 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Lfl_g08420 | CRR22 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Lfl_g10692 | CRR22 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Lfl_g34619 | OTP84 | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Msp_g41118 | CRR22 | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Nbi_g07674 | CRR22 | not classified & original description: none | 0.01 | OrthoFinder output from all 47 species | |
| Nbi_g19585 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Nbi_g20337 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Nbi_g23774 | OTP84 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ore_g07300 | CRR22 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ore_g16142 | No alias | ssDNA-binding protein *(OSB) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ore_g26690 | VAC1, ECB2, ATECB2 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Pir_g63838 | No alias | ssDNA-binding protein *(OSB) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Pnu_g04505 | CRR2 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Pnu_g22807 | CRR22 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ppi_g35259 | RARE1 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ppi_g63223 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0073.g017029 | No alias | not classified & original description: CDS=1-2337 | 0.03 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0214.g026002 | No alias | not classified & original description: CDS=74-2389 | 0.03 | OrthoFinder output from all 47 species | |
| Sam_g02933 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Sam_g03885 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Sam_g10477 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Sam_g10509 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Sam_g17989 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Sam_g30172 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Sam_g30280 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Sam_g49086 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Sam_g51436 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Sam_g52449 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Smo93321 | No alias | Pentatricopeptide repeat-containing protein At4g13650... | 0.01 | OrthoFinder output from all 47 species | |
| Smo99756 | No alias | Pentatricopeptide repeat-containing protein At2g39620... | 0.03 | OrthoFinder output from all 47 species | |
| Tin_g05116 | VAC1, ECB2, ATECB2 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Tin_g13689 | OTP86 | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Tin_g20109 | OTP84 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Tin_g26871 | No alias | not classified & original description: none | 0.01 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No Predicted GO terms available for this sequence |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR002885 | Pentatricopeptide_repeat | 250 | 275 |
| IPR002885 | Pentatricopeptide_repeat | 415 | 437 |
| IPR002885 | Pentatricopeptide_repeat | 49 | 74 |
| IPR002885 | Pentatricopeptide_repeat | 516 | 539 |
| IPR002885 | Pentatricopeptide_repeat | 276 | 322 |
| IPR002885 | Pentatricopeptide_repeat | 440 | 487 |
| IPR002885 | Pentatricopeptide_repeat | 75 | 121 |
| IPR002885 | Pentatricopeptide_repeat | 175 | 223 |
| No external refs found! |
