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  5. Aspi01Gene72853.t1

Aspi01Gene72853.t1 (ABCG40, PDR12,...)


Aliases : ABCG40, PDR12, ATABCG40, ATPDR12, Aspi01Gene72853

Description : subfamily ABCG transporter & original description: none


Gene families : OG0000071 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000071_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Aspi01Gene72853.t1

Target Alias Description ECC score Gene Family Method Actions
Aop_g68659 ABCG40, PDR12,... not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aspi01Gene01664.t1 ABCG40, PDR12,... subfamily ABCG transporter & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene02114.t2 ABCG40, PDR12,... subfamily ABCG transporter & original description: none 0.05 OrthoFinder output from all 47 species
Aspi01Gene02114.t4 PEN3, ABCG36,... subfamily ABCG transporter & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene02131.t1 PEN3, ABCG36,... subfamily ABCG transporter & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene02142.t1 PEN3, ABCG36,... subfamily ABCG transporter & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene15524.t1 OEP80, EMB213,... not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene64035.t1 PDR6, ATPDR6,... subfamily ABCG transporter & original description: none 0.09 OrthoFinder output from all 47 species
Aspi01Gene69802.t1 ATPDR3, PDR3,... subfamily ABCG transporter & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene69808.t2 ATPDR3, PDR3,... not classified & original description: none 0.07 OrthoFinder output from all 47 species
Aspi01Gene72840.t1 ABCG40, PDR12,... subfamily ABCG transporter & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene72848.t1 ABCG40, PDR12,... subfamily ABCG transporter & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g39411 ATPDR7, PDR7 subfamily ABCG transporter & original description: none 0.04 OrthoFinder output from all 47 species
MA_964768g0010 ABCG40, PDR12,... ABC transporter G family member 39 OS=Oryza sativa... 0.02 OrthoFinder output from all 47 species
Pp3c18_21520V3.1 PDR1, ATPDR1,... ABC-2 and Plant PDR ABC-type transporter family protein 0.01 OrthoFinder output from all 47 species
Pp3c2_16850V3.1 PDR1, ATPDR1, Pp3c2_16850 pleiotropic drug resistance 7 0.03 OrthoFinder output from all 47 species
Ppi_g15527 PDR6, ATPDR6 subfamily ABCG transporter & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g62332 ABCG40, PDR12,... not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g63364 ABCG40, PDR12,... not classified & original description: none 0.07 OrthoFinder output from all 47 species
Sam_g50120 No alias subfamily ABCG transporter & original description: none 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA Interproscan
CC GO:0016020 membrane IEA Interproscan
MF GO:0140359 ABC-type transporter activity IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR003439 ABC_transporter-like_ATP-bd 894 1046
IPR043926 ABCG_dom 395 474
IPR013525 ABC_2_trans 516 728
IPR013525 ABC_2_trans 1192 1404
IPR013581 PDR_assoc 733 798
IPR029481 ABC_trans_N 108 155
IPR003439 ABC_transporter-like_ATP-bd 180 362
No external refs found!