Description : ssDNA-binding protein *(OSB) & original description: none
Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Aev_g37527 | |
| Cluster | HCCA: Cluster_123 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00033p00240190 | evm_27.TU.AmTr_v1... | Cell cycle.organelle machineries.DNA... | 0.02 | OrthoFinder output from all 47 species | |
| AMTR_s00049p00220350 | OTP85,... | Pentatricopeptide repeat-containing protein At2g02980,... | 0.03 | OrthoFinder output from all 47 species | |
| AT5G46460 | No alias | Pentatricopeptide repeat (PPR) superfamily protein | 0.04 | OrthoFinder output from all 47 species | |
| Adi_g058262 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Adi_g066611 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Adi_g069246 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Adi_g081792 | CRR22 | ssDNA-binding protein *(OSB) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ala_g06600 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ala_g18741 | OTP86 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ala_g31182 | CRR22 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ala_g36546 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ala_g38943 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Als_g05709 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Als_g06396 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Als_g06978 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Als_g07480 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Als_g07519 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Als_g15903 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Als_g18767 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Als_g26632 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Als_g27203 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Als_g30845 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Als_g31156 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Als_g32754 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Als_g33141 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Als_g33170 | No alias | ssDNA-binding protein *(OSB) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Als_g38696 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Als_g55326 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Als_g57869 | EMB2758 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aob_g06074 | No alias | RNA editing factor *(OTP87) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aob_g07964 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aob_g08449 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Aob_g12045 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aob_g14037 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aob_g14625 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Aob_g24237 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aob_g26963 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aob_g27846 | REME1 | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Aob_g28230 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aob_g36676 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aob_g37112 | CRR22 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aob_g37584 | OTP86 | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Aob_g40212 | No alias | not classified & original description: none | 0.06 | OrthoFinder output from all 47 species | |
| Aop_g03233 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aop_g07339 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Aspi01Gene59819.t1 | Aspi01Gene59819 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Azfi_s0083.g038894 | CRR2 | not classified & original description: CDS=273-1679 | 0.03 | OrthoFinder output from all 47 species | |
| Cba_g02715 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Cba_g04081 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Cba_g06597 | No alias | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Cba_g07698 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Cba_g07724 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Cba_g19308 | VAC1, ECB2, ATECB2 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Cba_g19888 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Cba_g19909 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Cba_g25491 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Cba_g34636 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Cba_g38987 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Cba_g42618 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Cba_g43844 | CRR2 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Cba_g45888 | CRR2 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Cba_g67474 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ceric.07G000400.1 | Ceric.07G000400 | not classified & original description: pacid=50627195... | 0.02 | OrthoFinder output from all 47 species | |
| Ceric.13G028100.1 | Ceric.13G028100 | not classified & original description: pacid=50635194... | 0.02 | OrthoFinder output from all 47 species | |
| Ceric.13G050400.1 | Ceric.13G050400 | not classified & original description: pacid=50636404... | 0.03 | OrthoFinder output from all 47 species | |
| Ceric.13G057100.1 | Ceric.13G057100 | not classified & original description: pacid=50635531... | 0.02 | OrthoFinder output from all 47 species | |
| Ceric.13G069100.1 | CRR22, Ceric.13G069100 | not classified & original description: pacid=50635982... | 0.02 | OrthoFinder output from all 47 species | |
| Ceric.17G054900.1 | DOT4, Ceric.17G054900 | not classified & original description: pacid=50617812... | 0.03 | OrthoFinder output from all 47 species | |
| Ceric.21G030500.1 | Ceric.21G030500 | not classified & original description: pacid=50603713... | 0.04 | OrthoFinder output from all 47 species | |
| Ceric.31G066800.1 | Ceric.31G066800 | not classified & original description: pacid=50573808... | 0.02 | OrthoFinder output from all 47 species | |
| Ceric.34G000500.1 | Ceric.34G000500 | not classified & original description: pacid=50623432... | 0.03 | OrthoFinder output from all 47 species | |
| Dac_g11669 | No alias | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Dac_g14137 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dac_g15109 | OTP84 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Dac_g18563 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dac_g23537 | OTP84 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dac_g25885 | No alias | ssDNA-binding protein *(OSB) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dac_g29379 | OTP85 | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Dac_g30064 | CRR22 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dac_g38506 | OSB3 | ssDNA-binding protein *(OSB) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dac_g39373 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dac_g42987 | DOT4 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dac_g43240 | No alias | ssDNA-binding protein *(OSB) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dac_g43653 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dac_g44494 | No alias | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Dac_g44606 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Dcu_g08906 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dcu_g08949 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dcu_g08961 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dcu_g09000 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Dcu_g35846 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Dcu_g50188 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dde_g05845 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Dde_g21648 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dde_g35725 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ehy_g00984 | OSB3 | cofactor of plastid-encoded RNA polymerase *(TAC9) &... | 0.02 | OrthoFinder output from all 47 species | |
| Ehy_g12128 | No alias | ssDNA-binding protein *(OSB) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ehy_g15341 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ehy_g18446 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ehy_g26917 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| GSVIVT01028747001 | No alias | Putative pentatricopeptide repeat-containing protein... | 0.02 | OrthoFinder output from all 47 species | |
| Gb_10113 | No alias | Pentatricopeptide repeat-containing protein At1g25360... | 0.03 | OrthoFinder output from all 47 species | |
| Gb_38938 | No alias | Pentatricopeptide repeat-containing protein At2g27610... | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os04g14130.1 | LOC_Os04g14130 | Pentatricopeptide repeat-containing protein At5g16860... | 0.02 | OrthoFinder output from all 47 species | |
| LOC_Os04g33840.1 | LOC_Os04g33840 | Putative pentatricopeptide repeat-containing protein... | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os07g13540.1 | EMB2261, LOC_Os07g13540 | Pentatricopeptide repeat-containing protein At2g22070... | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os08g28830.1 | LOC_Os08g28830 | Putative pentatricopeptide repeat-containing protein... | 0.04 | OrthoFinder output from all 47 species | |
| LOC_Os11g45410.1 | LOC_Os11g45410 | Pentatricopeptide repeat-containing protein At4g13650... | 0.02 | OrthoFinder output from all 47 species | |
| Len_g04309 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Len_g04783 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Len_g04787 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Len_g04791 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Len_g05370 | CRR22 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Len_g18295 | OTP86 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Len_g18986 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Len_g40700 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Len_g58985 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Lfl_g03483 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| MA_187514g0010 | No alias | Pentatricopeptide repeat-containing protein At1g11290,... | 0.03 | OrthoFinder output from all 47 species | |
| Msp_g03905 | REME1 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Msp_g14416 | CRR22 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Msp_g17145 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Msp_g28612 | No alias | ssDNA-binding protein *(OSB) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Nbi_g05873 | OTP86 | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Nbi_g27841 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Nbi_g42294 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Ore_g06871 | No alias | ssDNA-binding protein *(OSB) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ore_g12551 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ore_g15077 | CRR2 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ore_g15248 | OSB1 | ssDNA-binding protein *(OSB) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ore_g26843 | CRR22 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Pir_g12406 | No alias | ssDNA-binding protein *(OSB) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Pir_g13583 | VAC1, ECB2, ATECB2 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Pir_g15819 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Pir_g30131 | CRR22 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Pir_g63292 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Pir_g63807 | No alias | ssDNA-binding protein *(OSB) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Pp3c17_4890V3.1 | Pp3c17_4890 | mitochondrial editing factor 22 | 0.01 | OrthoFinder output from all 47 species | |
| Ppi_g06501 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ppi_g31855 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ppi_g39647 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ppi_g59234 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ppi_g59292 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ppi_g59330 | OTP84 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ppi_g62370 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0116.g021049 | VAC1, ECB2, ATECB2 | not classified & original description: CDS=1-2289 | 0.02 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0124.g021578 | MEF19 | not classified & original description: CDS=1-1950 | 0.03 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0132.g022166 | No alias | not classified & original description: CDS=1-2514 | 0.03 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s3367.g028731 | No alias | not classified & original description: CDS=2473-3459 | 0.02 | OrthoFinder output from all 47 species | |
| Sam_g11900 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Sam_g25244 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Smo182822 | No alias | Pentatricopeptide repeat-containing protein At1g74600,... | 0.02 | OrthoFinder output from all 47 species | |
| Smo99756 | No alias | Pentatricopeptide repeat-containing protein At2g39620... | 0.02 | OrthoFinder output from all 47 species | |
| Solyc03g051780.3.1 | Solyc03g051780 | Putative pentatricopeptide repeat-containing protein... | 0.03 | OrthoFinder output from all 47 species | |
| Solyc03g116840.3.1 | Solyc03g116840 | RNA editing factor (OTP81) | 0.03 | OrthoFinder output from all 47 species | |
| Solyc04g051480.1.1 | OTP84, Solyc04g051480 | Pentatricopeptide repeat-containing protein At4g13650... | 0.03 | OrthoFinder output from all 47 species | |
| Solyc07g005170.3.1 | Solyc07g005170 | Pentatricopeptide repeat-containing protein At1g09410,... | 0.03 | OrthoFinder output from all 47 species | |
| Solyc09g090220.3.1 | Solyc09g090220 | Putative pentatricopeptide repeat-containing protein... | 0.03 | OrthoFinder output from all 47 species | |
| Spa_g09284 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Spa_g09940 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Spa_g12113 | CRR2 | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Spa_g12223 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Spa_g26191 | EMB2261 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Spa_g30543 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Spa_g33897 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Spa_g47167 | CRR22 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Spa_g55537 | DOT4 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Tin_g17821 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Tin_g35068 | CRR2 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Tin_g45880 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| BP | GO:0000375 | RNA splicing, via transesterification reactions | IEP | HCCA |
| BP | GO:0000377 | RNA splicing, via transesterification reactions with bulged adenosine as nucleophile | IEP | HCCA |
| BP | GO:0000398 | mRNA splicing, via spliceosome | IEP | HCCA |
| BP | GO:0006396 | RNA processing | IEP | HCCA |
| BP | GO:0006397 | mRNA processing | IEP | HCCA |
| BP | GO:0008380 | RNA splicing | IEP | HCCA |
| BP | GO:0016070 | RNA metabolic process | IEP | HCCA |
| BP | GO:0016071 | mRNA metabolic process | IEP | HCCA |
No InterPro domains available for this sequence
| No external refs found! |
