Description : not classified & original description: none
Gene families : OG0000008 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Aev_g39254 | |
| Cluster | HCCA: Cluster_28 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00006p00267830 | evm_27.TU.AmTr_v1... | Nutrient uptake.iron uptake.regulation.IDF1 IRT1-ubiquitin ligase | 0.03 | OrthoFinder output from all 47 species | |
| AMTR_s00007p00056710 | evm_27.TU.AmTr_v1... | Protein degradation.peptide tagging.Ubiquitin... | 0.02 | OrthoFinder output from all 47 species | |
| AMTR_s00008p00185200 | ATL6,... | Protein degradation.peptide tagging.Ubiquitin... | 0.04 | OrthoFinder output from all 47 species | |
| AMTR_s00008p00200880 | evm_27.TU.AmTr_v1... | Protein degradation.peptide tagging.Ubiquitin... | 0.03 | OrthoFinder output from all 47 species | |
| AMTR_s00025p00229930 | evm_27.TU.AmTr_v1... | Protein degradation.peptide tagging.Ubiquitin... | 0.03 | OrthoFinder output from all 47 species | |
| AMTR_s00044p00211560 | evm_27.TU.AmTr_v1... | Protein degradation.peptide tagging.Ubiquitin... | 0.02 | OrthoFinder output from all 47 species | |
| AT1G15100 | RHA2A | RING-H2 finger A2A | 0.02 | OrthoFinder output from all 47 species | |
| AT1G49210 | No alias | RING/U-box superfamily protein | 0.02 | OrthoFinder output from all 47 species | |
| AT2G35910 | No alias | RING/U-box superfamily protein | 0.03 | OrthoFinder output from all 47 species | |
| AT2G42360 | No alias | RING/U-box superfamily protein | 0.04 | OrthoFinder output from all 47 species | |
| AT2G44578 | No alias | RING/U-box superfamily protein | 0.02 | OrthoFinder output from all 47 species | |
| AT3G05200 | ATL6 | RING/U-box superfamily protein | 0.03 | OrthoFinder output from all 47 species | |
| AT3G18773 | No alias | RING/U-box superfamily protein | 0.02 | OrthoFinder output from all 47 species | |
| AT3G43430 | No alias | RING/U-box superfamily protein | 0.02 | OrthoFinder output from all 47 species | |
| AT3G60966 | No alias | RING/U-box superfamily protein | 0.03 | OrthoFinder output from all 47 species | |
| AT4G00305 | No alias | RING/U-box superfamily protein | 0.03 | OrthoFinder output from all 47 species | |
| AT4G11360 | RHA1B | RING-H2 finger A1B | 0.02 | OrthoFinder output from all 47 species | |
| AT4G11370 | RHA1A | RING-H2 finger A1A | 0.02 | OrthoFinder output from all 47 species | |
| AT4G38140 | No alias | RING/U-box superfamily protein | 0.04 | OrthoFinder output from all 47 species | |
| AT5G07040 | No alias | RING/U-box superfamily protein | 0.03 | OrthoFinder output from all 47 species | |
| AT5G10380 | ATRING1, RING1 | RING/U-box superfamily protein | 0.02 | OrthoFinder output from all 47 species | |
| Als_g57614 | No alias | RING-H2-class ATL-subclass E3 ubiquitin ligase &... | 0.03 | OrthoFinder output from all 47 species | |
| Aob_g30636 | No alias | RING-H2-class ATL-subclass E3 ubiquitin ligase &... | 0.02 | OrthoFinder output from all 47 species | |
| Aop_g12490 | No alias | RING-H2-class ATL-subclass E3 ubiquitin ligase &... | 0.02 | OrthoFinder output from all 47 species | |
| Azfi_s0091.g042816 | No alias | not classified & original description: CDS=1-813 | 0.02 | OrthoFinder output from all 47 species | |
| Azfi_s0415.g068611 | ATL6 | RING-H2-class ATL-subclass E3 ubiquitin ligase &... | 0.03 | OrthoFinder output from all 47 species | |
| Ceric.01G113700.1 | Ceric.01G113700 | RING-H2-class ATL-subclass E3 ubiquitin ligase &... | 0.03 | OrthoFinder output from all 47 species | |
| Ceric.07G057800.1 | ATL6, Ceric.07G057800 | RING-H2-class ATL-subclass E3 ubiquitin ligase &... | 0.03 | OrthoFinder output from all 47 species | |
| Ceric.09G083300.1 | Ceric.09G083300 | not classified & original description: pacid=50586861... | 0.03 | OrthoFinder output from all 47 species | |
| Ceric.09G083800.1 | Ceric.09G083800 | not classified & original description: pacid=50587862... | 0.03 | OrthoFinder output from all 47 species | |
| Ceric.13G075200.1 | Ceric.13G075200 | RING-H2-class ATL-subclass E3 ubiquitin ligase &... | 0.04 | OrthoFinder output from all 47 species | |
| Ceric.22G061600.1 | ATL2, TL2,... | RING-H2-class ATL-subclass E3 ubiquitin ligase &... | 0.03 | OrthoFinder output from all 47 species | |
| Ceric.22G062000.1 | Ceric.22G062000 | RING-H2-class ATL-subclass E3 ubiquitin ligase &... | 0.02 | OrthoFinder output from all 47 species | |
| Ceric.29G079800.1 | Ceric.29G079800 | not classified & original description: pacid=50625628... | 0.03 | OrthoFinder output from all 47 species | |
| Ceric.35G023500.1 | Ceric.35G023500 | RING-H2-class ATL-subclass E3 ubiquitin ligase &... | 0.02 | OrthoFinder output from all 47 species | |
| Ceric.36G022800.1 | Ceric.36G022800 | not classified & original description: pacid=50568753... | 0.04 | OrthoFinder output from all 47 species | |
| Ceric.36G022900.1 | Ceric.36G022900 | not classified & original description: pacid=50568300... | 0.03 | OrthoFinder output from all 47 species | |
| Dcu_g00774 | ATL2, TL2 | RING-H2-class ATL-subclass E3 ubiquitin ligase &... | 0.03 | OrthoFinder output from all 47 species | |
| Dde_g06659 | ATL5 | RING-H2-class ATL-subclass E3 ubiquitin ligase &... | 0.03 | OrthoFinder output from all 47 species | |
| GSVIVT01000538001 | No alias | Protein degradation.peptide tagging.Ubiquitin... | 0.03 | OrthoFinder output from all 47 species | |
| GSVIVT01009096001 | No alias | Protein degradation.peptide tagging.Ubiquitin... | 0.02 | OrthoFinder output from all 47 species | |
| GSVIVT01020665001 | No alias | Protein degradation.peptide tagging.Ubiquitin... | 0.05 | OrthoFinder output from all 47 species | |
| GSVIVT01027524001 | No alias | Protein degradation.peptide tagging.Ubiquitin... | 0.02 | OrthoFinder output from all 47 species | |
| GSVIVT01027769001 | No alias | Protein degradation.peptide tagging.Ubiquitin... | 0.02 | OrthoFinder output from all 47 species | |
| Gb_02533 | ATL2, TL2 | RING-H2-class E3 ligase | 0.03 | OrthoFinder output from all 47 species | |
| Gb_04642 | ATL2, TL2 | RING-H2-class E3 ligase | 0.03 | OrthoFinder output from all 47 species | |
| Gb_04643 | No alias | RING-H2 finger protein ATL60 OS=Arabidopsis thaliana... | 0.05 | OrthoFinder output from all 47 species | |
| Gb_04644 | ATL2, TL2 | RING-H2-class E3 ligase | 0.04 | OrthoFinder output from all 47 species | |
| Gb_04645 | No alias | RING-H2-class E3 ligase | 0.05 | OrthoFinder output from all 47 species | |
| Gb_20844 | No alias | no hits & (original description: none) | 0.02 | OrthoFinder output from all 47 species | |
| Gb_40644 | BRH1 | no hits & (original description: none) | 0.04 | OrthoFinder output from all 47 species | |
| LOC_Os01g16120.1 | RHA2A, LOC_Os01g16120 | no hits & (original description: none) | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os01g61470.1 | LOC_Os01g61470 | RING-H2-class E3 ligase | 0.02 | OrthoFinder output from all 47 species | |
| LOC_Os01g64620.1 | LOC_Os01g64620 | RING-H2 finger protein ATL72 OS=Arabidopsis thaliana... | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os02g45780.1 | LOC_Os02g45780 | no hits & (original description: none) | 0.02 | OrthoFinder output from all 47 species | |
| LOC_Os02g52210.1 | ATL31, CNI1,... | RING-H2-class E3 ligase | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os03g05560.1 | LOC_Os03g05560 | RING-H2-class E3 ligase | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os03g57410.1 | LOC_Os03g57410 | Putative RING-H2 finger protein ATL71 OS=Arabidopsis... | 0.05 | OrthoFinder output from all 47 species | |
| LOC_Os04g16970.1 | LOC_Os04g16970 | no hits & (original description: none) | 0.02 | OrthoFinder output from all 47 species | |
| LOC_Os04g49160.1 | LOC_Os04g49160 | no hits & (original description: none) | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os06g08820.1 | LOC_Os06g08820 | RING-H2-class E3 ligase | 0.02 | OrthoFinder output from all 47 species | |
| LOC_Os07g06560.1 | LOC_Os07g06560 | RING-H2-class E3 ligase | 0.04 | OrthoFinder output from all 47 species | |
| LOC_Os08g06090.1 | RHA3B, LOC_Os08g06090 | no hits & (original description: none) | 0.02 | OrthoFinder output from all 47 species | |
| LOC_Os09g20980.1 | LOC_Os09g20980 | RING-H2-class E3 ligase | 0.02 | OrthoFinder output from all 47 species | |
| LOC_Os10g42390.1 | LOC_Os10g42390 | RING-H2-class E3 ligase | 0.02 | OrthoFinder output from all 47 species | |
| LOC_Os12g24490.1 | LOC_Os12g24490 | RING-H2-class E3 ligase | 0.02 | OrthoFinder output from all 47 species | |
| LOC_Os12g42540.1 | LOC_Os12g42540 | RING-H2 finger protein ATL70 OS=Arabidopsis thaliana... | 0.05 | OrthoFinder output from all 47 species | |
| MA_10021g0010 | No alias | RING-H2-class E3 ligase | 0.02 | OrthoFinder output from all 47 species | |
| MA_101154g0010 | ATL2, TL2 | RING-H2-class E3 ligase | 0.03 | OrthoFinder output from all 47 species | |
| MA_10145129g0010 | No alias | no hits & (original description: none) | 0.02 | OrthoFinder output from all 47 species | |
| MA_1623327g0010 | No alias | no hits & (original description: none) | 0.02 | OrthoFinder output from all 47 species | |
| MA_17249g0010 | No alias | Putative RING-H2 finger protein ATL71 OS=Arabidopsis... | 0.02 | OrthoFinder output from all 47 species | |
| MA_201391g0010 | BRH1 | Probable E3 ubiquitin-protein ligase RHA1A... | 0.03 | OrthoFinder output from all 47 species | |
| MA_214717g0010 | RHA3B | no hits & (original description: none) | 0.04 | OrthoFinder output from all 47 species | |
| MA_223372g0010 | No alias | no hits & (original description: none) | 0.02 | OrthoFinder output from all 47 species | |
| MA_26001g0020 | ATL2, TL2 | RING-H2-class E3 ligase | 0.04 | OrthoFinder output from all 47 species | |
| MA_289646g0010 | RHA3B | E3 ubiquitin-protein ligase ATL23 OS=Arabidopsis... | 0.02 | OrthoFinder output from all 47 species | |
| MA_308999g0010 | ATL2, TL2 | RING-H2 finger protein ATL3 OS=Arabidopsis thaliana... | 0.04 | OrthoFinder output from all 47 species | |
| MA_373963g0010 | No alias | no hits & (original description: none) | 0.02 | OrthoFinder output from all 47 species | |
| MA_43543g0010 | ATL2, TL2 | RING-H2-class E3 ligase | 0.02 | OrthoFinder output from all 47 species | |
| MA_5170g0020 | BRH1 | no hits & (original description: none) | 0.02 | OrthoFinder output from all 47 species | |
| MA_5319g0010 | No alias | RING-H2-class E3 ligase | 0.04 | OrthoFinder output from all 47 species | |
| MA_6931619g0010 | No alias | RING-H2-class E3 ligase | 0.04 | OrthoFinder output from all 47 species | |
| MA_69343g0010 | No alias | RING-H2-class E3 ligase | 0.02 | OrthoFinder output from all 47 species | |
| MA_711804g0010 | No alias | no hits & (original description: none) | 0.02 | OrthoFinder output from all 47 species | |
| MA_786911g0010 | ATL2, TL2 | RING-H2-class E3 ligase | 0.02 | OrthoFinder output from all 47 species | |
| MA_895676g0010 | No alias | no hits & (original description: none) | 0.02 | OrthoFinder output from all 47 species | |
| Msp_g04081 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ore_g03798 | No alias | RING-H2-class ATL-subclass E3 ubiquitin ligase &... | 0.02 | OrthoFinder output from all 47 species | |
| Ore_g04496 | DEP | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ore_g30955 | XERICO | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Pir_g11149 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Pir_g26309 | No alias | RING-H2-class ATL-subclass E3 ubiquitin ligase &... | 0.03 | OrthoFinder output from all 47 species | |
| Ppi_g46048 | No alias | RING-H2-class ATL-subclass E3 ubiquitin ligase &... | 0.02 | OrthoFinder output from all 47 species | |
| Smo8844 | No alias | Protein degradation.peptide tagging.Ubiquitin... | 0.02 | OrthoFinder output from all 47 species | |
| Solyc03g083460.3.1 | Solyc03g083460 | RING-H2 finger protein ATL22 OS=Arabidopsis thaliana... | 0.03 | OrthoFinder output from all 47 species | |
| Solyc03g123680.1.1 | Solyc03g123680 | RING-H2-class E3 ligase | 0.02 | OrthoFinder output from all 47 species | |
| Solyc05g010170.2.1 | XERICO, Solyc05g010170 | no hits & (original description: none) | 0.02 | OrthoFinder output from all 47 species | |
| Solyc06g063110.3.1 | Solyc06g063110 | RING-H2-class E3 ligase | 0.02 | OrthoFinder output from all 47 species | |
| Solyc08g008080.1.1 | BRH1, Solyc08g008080 | E3 ubiquitin-protein ligase RHA1B OS=Arabidopsis... | 0.03 | OrthoFinder output from all 47 species | |
| Solyc09g066300.3.1 | Solyc09g066300 | RING-H2-class E3 ligase | 0.03 | OrthoFinder output from all 47 species | |
| Solyc10g008080.3.1 | Solyc10g008080 | RING-H2-class E3 ligase | 0.03 | OrthoFinder output from all 47 species | |
| Solyc11g005290.1.1 | Solyc11g005290 | RING-H2-class E3 ligase | 0.02 | OrthoFinder output from all 47 species | |
| Spa_g17343 | ATL6 | RING-H2-class ATL-subclass E3 ubiquitin ligase &... | 0.02 | OrthoFinder output from all 47 species | |
| Tin_g31919 | BRH1 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Zm00001e000398_P001 | Zm00001e000398 | RING-H2-class E3 ligase | 0.02 | OrthoFinder output from all 47 species | |
| Zm00001e003264_P001 | Zm00001e003264 | no hits & (original description: none) | 0.03 | OrthoFinder output from all 47 species | |
| Zm00001e007129_P001 | Zm00001e007129 | RING-H2-class E3 ligase | 0.02 | OrthoFinder output from all 47 species | |
| Zm00001e011901_P001 | Zm00001e011901 | RING-H2-class E3 ligase | 0.02 | OrthoFinder output from all 47 species | |
| Zm00001e014832_P001 | Zm00001e014832 | RING-H2-class E3 ligase | 0.02 | OrthoFinder output from all 47 species | |
| Zm00001e022781_P001 | Zm00001e022781 | RING-H2-class E3 ligase | 0.04 | OrthoFinder output from all 47 species | |
| Zm00001e029032_P001 | Zm00001e029032 | RING-H2-class E3 ligase | 0.02 | OrthoFinder output from all 47 species | |
| Zm00001e030750_P001 | Zm00001e030750 | RING-H2-class E3 ligase | 0.02 | OrthoFinder output from all 47 species | |
| Zm00001e030930_P001 | ATL3, Zm00001e030930 | no hits & (original description: none) | 0.03 | OrthoFinder output from all 47 species | |
| Zm00001e032838_P001 | Zm00001e032838 | RING-H2-class E3 ligase | 0.02 | OrthoFinder output from all 47 species | |
| Zm00001e034421_P001 | ATL6, Zm00001e034421 | RING-H2-class E3 ligase | 0.02 | OrthoFinder output from all 47 species | |
| Zm00001e035560_P001 | ATL3, Zm00001e035560 | RING-H2-class E3 ligase | 0.03 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| BP | GO:0009719 | response to endogenous stimulus | IEP | HCCA |
| BP | GO:0009725 | response to hormone | IEP | HCCA |
| BP | GO:0009733 | response to auxin | IEP | HCCA |
| BP | GO:0010033 | response to organic substance | IEP | HCCA |
| BP | GO:0042221 | response to chemical | IEP | HCCA |
No InterPro domains available for this sequence
| No external refs found! |
