Aliases : CRR22
Description : not classified & original description: none
Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00029p00062420 | evm_27.TU.AmTr_v1... | Pentatricopeptide repeat-containing protein At3g20730... | 0.03 | OrthoFinder output from all 47 species | |
| Adi_g101211 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ala_g09664 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ala_g11338 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aob_g12045 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aob_g27910 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aop_g20910 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aop_g36436 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aspi01Gene71957.t1 | EMB2261, Aspi01Gene71957 | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Azfi_s0001.g000142 | No alias | not classified & original description: CDS=1-1389 | 0.03 | OrthoFinder output from all 47 species | |
| Azfi_s0002.g001409 | No alias | not classified & original description: CDS=1-2469 | 0.03 | OrthoFinder output from all 47 species | |
| Azfi_s0004.g008304 | OTP84 | not classified & original description: CDS=1-2247 | 0.02 | OrthoFinder output from all 47 species | |
| Azfi_s0028.g023821 | No alias | not classified & original description: CDS=1-2478 | 0.03 | OrthoFinder output from all 47 species | |
| Azfi_s0127.g048736 | No alias | not classified & original description: CDS=1-3153 | 0.02 | OrthoFinder output from all 47 species | |
| Azfi_s0141.g051350 | No alias | not classified & original description: CDS=124-2304 | 0.02 | OrthoFinder output from all 47 species | |
| Azfi_s0261.g060752 | CRR22 | not classified & original description: CDS=1-1500 | 0.03 | OrthoFinder output from all 47 species | |
| Cba_g05443 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Cba_g19909 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Cba_g20235 | VAC1, ECB2, ATECB2 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Cba_g67913 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ceric.10G063700.1 | Ceric.10G063700 | not classified & original description: pacid=50612924... | 0.03 | OrthoFinder output from all 47 species | |
| Ceric.17G054900.1 | DOT4, Ceric.17G054900 | not classified & original description: pacid=50617812... | 0.02 | OrthoFinder output from all 47 species | |
| Ceric.27G067100.1 | CRR22, Ceric.27G067100 | not classified & original description: pacid=50605115... | 0.03 | OrthoFinder output from all 47 species | |
| Dac_g14137 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dac_g39373 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dcu_g07713 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dde_g17941 | OTP86 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ehy_g14557 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Gb_07336 | EMB2261 | Pentatricopeptide repeat-containing protein At4g02750... | 0.03 | OrthoFinder output from all 47 species | |
| Len_g03910 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Len_g05443 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Len_g18045 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Len_g18932 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Lfl_g18570 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Msp_g11675 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Msp_g13328 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Msp_g13988 | CRR21 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ore_g19382 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Pir_g12221 | OTP86 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Pnu_g04238 | OTP84 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Pnu_g20675 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0040.g012420 | No alias | not classified & original description: CDS=519-2384 | 0.02 | OrthoFinder output from all 47 species | |
| Sam_g12389 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Sam_g21956 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Smo92492 | No alias | Pentatricopeptide repeat-containing protein At4g02750... | 0.03 | OrthoFinder output from all 47 species | |
| Smo99647 | No alias | Pentatricopeptide repeat-containing protein At5g27110... | 0.03 | OrthoFinder output from all 47 species | |
| Solyc02g084830.4.1 | Solyc02g084830 | Pentatricopeptide repeat-containing protein At5g44230... | 0.02 | OrthoFinder output from all 47 species | |
| Solyc03g116840.3.1 | Solyc03g116840 | RNA editing factor (OTP81) | 0.03 | OrthoFinder output from all 47 species | |
| Solyc09g009950.4.1 | Solyc09g009950 | RNA editing factor (MEF10) | 0.03 | OrthoFinder output from all 47 species | |
| Solyc11g071370.1.1 | PDE247, CLB19,... | RNA editing factor (CLB19) | 0.02 | OrthoFinder output from all 47 species | |
| Spa_g14171 | EMB2758 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Spa_g18026 | VAC1, ECB2, ATECB2 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Spa_g44754 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Spa_g54669 | MEF9 | ssDNA-binding protein *(OSB) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Tin_g35068 | CRR2 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Zm00001e014825_P001 | Zm00001e014825 | Pentatricopeptide repeat-containing protein At2g27610... | 0.02 | OrthoFinder output from all 47 species | |
| Zm00001e039026_P001 | OTP82, Zm00001e039026 | Pentatricopeptide repeat-containing protein At5g48910... | 0.02 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003674 | molecular_function | IEP | HCCA |
| MF | GO:0004797 | thymidine kinase activity | IEP | HCCA |
| MF | GO:0005488 | binding | IEP | HCCA |
| MF | GO:0005515 | protein binding | IEP | HCCA |
| BP | GO:0006886 | intracellular protein transport | IEP | HCCA |
| BP | GO:0008104 | protein localization | IEP | HCCA |
| BP | GO:0015031 | protein transport | IEP | HCCA |
| MF | GO:0019136 | deoxynucleoside kinase activity | IEP | HCCA |
| MF | GO:0019205 | nucleobase-containing compound kinase activity | IEP | HCCA |
| MF | GO:0019206 | nucleoside kinase activity | IEP | HCCA |
| MF | GO:0019899 | enzyme binding | IEP | HCCA |
| MF | GO:0031267 | small GTPase binding | IEP | HCCA |
| BP | GO:0033036 | macromolecule localization | IEP | HCCA |
| BP | GO:0045184 | establishment of protein localization | IEP | HCCA |
| BP | GO:0046907 | intracellular transport | IEP | HCCA |
| MF | GO:0051020 | GTPase binding | IEP | HCCA |
| BP | GO:0051641 | cellular localization | IEP | HCCA |
| BP | GO:0051649 | establishment of localization in cell | IEP | HCCA |
| BP | GO:0070727 | cellular macromolecule localization | IEP | HCCA |
| BP | GO:0071702 | organic substance transport | IEP | HCCA |
| BP | GO:0071705 | nitrogen compound transport | IEP | HCCA |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR002885 | Pentatricopeptide_repeat | 200 | 225 |
| IPR002885 | Pentatricopeptide_repeat | 99 | 124 |
| IPR002885 | Pentatricopeptide_repeat | 125 | 173 |
| IPR002885 | Pentatricopeptide_repeat | 427 | 474 |
| IPR002885 | Pentatricopeptide_repeat | 227 | 274 |
| IPR002885 | Pentatricopeptide_repeat | 528 | 576 |
| IPR002885 | Pentatricopeptide_repeat | 326 | 374 |
| No external refs found! |
